Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TM4SF4P48230 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
TM4SF4P48230 AL121886.1-201ENST00000358609 435 ntBASIC6.1□□□□□ -1.43
TM4SF4P48230 RPL5P19-201ENST00000404228 893 ntBASIC6.1□□□□□ -1.43
TM4SF4P48230 AP002530.1-201ENST00000405705 684 ntBASIC6.1□□□□□ -1.43
TM4SF4P48230 AC012519.1-201ENST00000424588 610 ntBASIC6.1□□□□□ -1.43
TM4SF4P48230 RSL24D1P6-201ENST00000426934 401 ntBASIC6.1□□□□□ -1.43
TM4SF4P48230 AL365220.1-201ENST00000432923 399 ntBASIC6.1□□□□□ -1.43
TM4SF4P48230 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.1□□□□□ -1.43
TM4SF4P48230 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC6.1□□□□□ -1.43
TM4SF4P48230 NDUFAF4P2-201ENST00000445374 520 ntBASIC6.1□□□□□ -1.43
TM4SF4P48230 OR52J1P-201ENST00000450596 932 ntBASIC6.1□□□□□ -1.43
TM4SF4P48230 RSU1P1-201ENST00000453416 441 ntBASIC6.1□□□□□ -1.43
TM4SF4P48230 snoU13.1-201ENST00000459157 104 ntBASIC6.1□□□□□ -1.43
TM4SF4P48230 RPS20P4-201ENST00000461659 355 ntBASIC6.1□□□□□ -1.43
TM4SF4P48230 CYCSP20-201ENST00000473154 315 ntBASIC6.1□□□□□ -1.43
TM4SF4P48230 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
TM4SF4P48230 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC6.1□□□□□ -1.43
TM4SF4P48230 ASNSP4-201ENST00000511103 447 ntBASIC6.1□□□□□ -1.43
TM4SF4P48230 SCARNA1-201ENST00000517138 166 ntBASIC6.1□□□□□ -1.43
TM4SF4P48230 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.1□□□□□ -1.43
TM4SF4P48230 OR5AM1P-201ENST00000532136 1032 ntBASIC6.1□□□□□ -1.43
TM4SF4P48230 CD69-203ENST00000536709 1020 ntTSL 2 BASIC6.1□□□□□ -1.43
TM4SF4P48230 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC6.1□□□□□ -1.43
TM4SF4P48230 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.1□□□□□ -1.43
TM4SF4P48230 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC6.1□□□□□ -1.43
TM4SF4P48230 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC6.1□□□□□ -1.43
TM4SF4P48230 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.1□□□□□ -1.43
TM4SF4P48230 RN7SL356P-201ENST00000582228 248 ntBASIC6.1□□□□□ -1.43
TM4SF4P48230 AL391358.1-201ENST00000605342 190 ntBASIC6.1□□□□□ -1.43
TM4SF4P48230 AL451049.1-201ENST00000608672 497 ntBASIC6.1□□□□□ -1.43
TM4SF4P48230 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.1□□□□□ -1.43
TM4SF4P48230 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.1□□□□□ -1.43
TM4SF4P48230 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TM4SF4P48230 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.1□□□□□ -1.43
TM4SF4P48230 AP000547.3-204ENST00000588548 2523 ntBASIC6.1□□□□□ -1.43
TM4SF4P48230 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
TM4SF4P48230 CASC19-284ENST00000642142 1868 ntBASIC6.1□□□□□ -1.43
TM4SF4P48230 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
TM4SF4P48230 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.1□□□□□ -1.43
TM4SF4P48230 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.1□□□□□ -1.43
TM4SF4P48230 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
TM4SF4P48230 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TM4SF4P48230 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TM4SF4P48230 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.09□□□□□ -1.43
TM4SF4P48230 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
TM4SF4P48230 AC068870.1-201ENST00000563737 2455 ntBASIC6.09□□□□□ -1.43
TM4SF4P48230 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TM4SF4P48230 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
TM4SF4P48230 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TM4SF4P48230 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC6.09□□□□□ -1.43
TM4SF4P48230 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
TM4SF4P48230 AC006511.3-201ENST00000624929 1783 ntBASIC6.09□□□□□ -1.43
TM4SF4P48230 AC092451.3-201ENST00000625067 1343 ntBASIC6.09□□□□□ -1.43
TM4SF4P48230 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.09□□□□□ -1.43
TM4SF4P48230 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TM4SF4P48230 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
TM4SF4P48230 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.09□□□□□ -1.43
TM4SF4P48230 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TM4SF4P48230 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC6.09□□□□□ -1.43
TM4SF4P48230 RIMKLBP2-201ENST00000424737 654 ntBASIC6.09□□□□□ -1.43
TM4SF4P48230 AC013262.1-201ENST00000426710 252 ntBASIC6.09□□□□□ -1.43
TM4SF4P48230 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.09□□□□□ -1.43
TM4SF4P48230 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC6.09□□□□□ -1.43
TM4SF4P48230 AC006994.1-201ENST00000438212 839 ntBASIC6.09□□□□□ -1.43
TM4SF4P48230 AC097499.1-201ENST00000444277 208 ntBASIC6.09□□□□□ -1.43
TM4SF4P48230 RPL36AP15-201ENST00000444514 266 ntBASIC6.09□□□□□ -1.43
TM4SF4P48230 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TM4SF4P48230 HMGB1P26-201ENST00000452520 628 ntBASIC6.09□□□□□ -1.43
TM4SF4P48230 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
TM4SF4P48230 AC020898.1-201ENST00000474167 787 ntBASIC6.09□□□□□ -1.43
TM4SF4P48230 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TM4SF4P48230 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.09□□□□□ -1.43
TM4SF4P48230 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TM4SF4P48230 AC093720.1-201ENST00000505681 714 ntBASIC6.09□□□□□ -1.43
TM4SF4P48230 AC133963.2-201ENST00000513686 578 ntBASIC6.09□□□□□ -1.43
TM4SF4P48230 snoU109.5-201ENST00000516231 132 ntBASIC6.09□□□□□ -1.43
TM4SF4P48230 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC6.09□□□□□ -1.43
TM4SF4P48230 AC104115.2-201ENST00000523026 687 ntBASIC6.09□□□□□ -1.43
TM4SF4P48230 GCSHP4-201ENST00000538792 439 ntBASIC6.09□□□□□ -1.43
TM4SF4P48230 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC6.09□□□□□ -1.43
TM4SF4P48230 AC020910.2-201ENST00000603635 610 ntBASIC6.09□□□□□ -1.43
TM4SF4P48230 MEMO1P5-201ENST00000604810 406 ntBASIC6.09□□□□□ -1.43
TM4SF4P48230 AC017076.1-201ENST00000607613 578 ntBASIC6.09□□□□□ -1.43
TM4SF4P48230 RNU6-1192P-201ENST00000612197 107 ntBASIC6.09□□□□□ -1.43
TM4SF4P48230 RMST_10.1-201ENST00000616309 154 ntBASIC6.09□□□□□ -1.43
TM4SF4P48230 RNU6-489P-201ENST00000618289 107 ntBASIC6.09□□□□□ -1.43
TM4SF4P48230 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TM4SF4P48230 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.09□□□□□ -1.43
TM4SF4P48230 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TM4SF4P48230 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TM4SF4P48230 AC144833.1-201ENST00000567953 4089 ntBASIC6.09□□□□□ -1.43
TM4SF4P48230 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TM4SF4P48230 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TM4SF4P48230 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TM4SF4P48230 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TM4SF4P48230 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
TM4SF4P48230 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TM4SF4P48230 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.09□□□□□ -1.43
TM4SF4P48230 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms