Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HNF4AP41235 MIR92A2-201ENST00000385299 75 ntBASIC5.16□□□□□ -1.58
HNF4AP41235 U3.25-201ENST00000391209 220 ntBASIC5.16□□□□□ -1.58
HNF4AP41235 CHMP1B2P-201ENST00000399581 597 ntBASIC5.16□□□□□ -1.58
HNF4AP41235 HSPA8P15-201ENST00000401676 786 ntBASIC5.16□□□□□ -1.58
HNF4AP41235 AL589655.1-201ENST00000405398 482 ntBASIC5.16□□□□□ -1.58
HNF4AP41235 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.16□□□□□ -1.58
HNF4AP41235 OR3A2-201ENST00000408891 1076 ntBASIC5.16□□□□□ -1.58
HNF4AP41235 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.16□□□□□ -1.58
HNF4AP41235 FAM204CP-201ENST00000424489 642 ntBASIC5.16□□□□□ -1.58
HNF4AP41235 AL121776.1-201ENST00000429337 372 ntBASIC5.16□□□□□ -1.58
HNF4AP41235 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.16□□□□□ -1.58
HNF4AP41235 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.16□□□□□ -1.58
HNF4AP41235 RPS11P7-201ENST00000442125 465 ntBASIC5.16□□□□□ -1.58
HNF4AP41235 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.16□□□□□ -1.58
HNF4AP41235 DNAJB5P1-201ENST00000454004 806 ntBASIC5.16□□□□□ -1.58
HNF4AP41235 APOOP2-201ENST00000461561 539 ntBASIC5.16□□□□□ -1.58
HNF4AP41235 PPIAP21-201ENST00000464473 501 ntBASIC5.16□□□□□ -1.58
HNF4AP41235 OR52A4P-202ENST00000481634 799 ntBASIC5.16□□□□□ -1.58
HNF4AP41235 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.16□□□□□ -1.58
HNF4AP41235 HMGB1P3-201ENST00000502802 616 ntBASIC5.16□□□□□ -1.58
HNF4AP41235 ENPP7P11-201ENST00000505915 627 ntBASIC5.16□□□□□ -1.58
HNF4AP41235 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.16□□□□□ -1.58
HNF4AP41235 RPL7L1P4-201ENST00000513004 707 ntBASIC5.16□□□□□ -1.58
HNF4AP41235 RNU6-513P-201ENST00000516104 104 ntBASIC5.16□□□□□ -1.58
HNF4AP41235 AC092709.1-201ENST00000521355 1045 ntBASIC5.16□□□□□ -1.58
HNF4AP41235 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.16□□□□□ -1.58
HNF4AP41235 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HNF4AP41235 BLZF2P-201ENST00000553776 1130 ntBASIC5.16□□□□□ -1.58
HNF4AP41235 SNRPGP1-201ENST00000553864 222 ntBASIC5.16□□□□□ -1.58
HNF4AP41235 NPM1P47-201ENST00000560843 856 ntBASIC5.16□□□□□ -1.58
HNF4AP41235 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.16□□□□□ -1.58
HNF4AP41235 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
HNF4AP41235 AC005252.1-201ENST00000604518 1063 ntBASIC5.16□□□□□ -1.58
HNF4AP41235 AC090948.2-201ENST00000607363 564 ntBASIC5.16□□□□□ -1.58
HNF4AP41235 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HNF4AP41235 AC011472.4-201ENST00000615848 491 ntBASIC5.16□□□□□ -1.58
HNF4AP41235 MIR4302-201ENST00000638058 60 ntBASIC5.16□□□□□ -1.58
HNF4AP41235 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
HNF4AP41235 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.16□□□□□ -1.58
HNF4AP41235 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
HNF4AP41235 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.16□□□□□ -1.58
HNF4AP41235 AC017002.4-201ENST00000604721 1525 ntBASIC5.16□□□□□ -1.58
HNF4AP41235 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HNF4AP41235 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HNF4AP41235 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
HNF4AP41235 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HNF4AP41235 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HNF4AP41235 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
HNF4AP41235 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HNF4AP41235 Z95331.1-201ENST00000623075 23112 ntBASIC5.15□□□□□ -1.58
HNF4AP41235 MIR133B-201ENST00000362210 119 ntBASIC5.15□□□□□ -1.59
HNF4AP41235 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.15□□□□□ -1.59
HNF4AP41235 RNU6-244P-201ENST00000391028 104 ntBASIC5.15□□□□□ -1.59
HNF4AP41235 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.15□□□□□ -1.59
HNF4AP41235 RN7SKP206-201ENST00000410823 293 ntBASIC5.15□□□□□ -1.59
HNF4AP41235 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.15□□□□□ -1.59
HNF4AP41235 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.15□□□□□ -1.59
HNF4AP41235 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.15□□□□□ -1.59
HNF4AP41235 CYCSP12-201ENST00000437729 300 ntBASIC5.15□□□□□ -1.59
HNF4AP41235 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.15□□□□□ -1.59
HNF4AP41235 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.15□□□□□ -1.59
HNF4AP41235 AC005229.2-201ENST00000456995 399 ntBASIC5.15□□□□□ -1.59
HNF4AP41235 CBX1P5-201ENST00000475330 559 ntBASIC5.15□□□□□ -1.59
HNF4AP41235 SIAH1P1-201ENST00000479411 923 ntBASIC5.15□□□□□ -1.59
HNF4AP41235 RPL7P40-201ENST00000481703 745 ntBASIC5.15□□□□□ -1.59
HNF4AP41235 RN7SL423P-201ENST00000486202 304 ntBASIC5.15□□□□□ -1.59
HNF4AP41235 AC016559.2-201ENST00000510759 359 ntBASIC5.15□□□□□ -1.59
HNF4AP41235 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.15□□□□□ -1.59
HNF4AP41235 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.15□□□□□ -1.59
HNF4AP41235 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.15□□□□□ -1.59
HNF4AP41235 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
HNF4AP41235 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.15□□□□□ -1.59
HNF4AP41235 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.15□□□□□ -1.59
HNF4AP41235 OR8A2P-201ENST00000528631 952 ntBASIC5.15□□□□□ -1.59
HNF4AP41235 YWHABP2-201ENST00000540201 713 ntBASIC5.15□□□□□ -1.59
HNF4AP41235 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.15□□□□□ -1.59
HNF4AP41235 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.15□□□□□ -1.59
HNF4AP41235 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.15□□□□□ -1.59
HNF4AP41235 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.15□□□□□ -1.59
HNF4AP41235 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.15□□□□□ -1.59
HNF4AP41235 AC023158.1-201ENST00000561632 1025 ntBASIC5.15□□□□□ -1.59
HNF4AP41235 AC106730.2-201ENST00000566641 540 ntBASIC5.15□□□□□ -1.59
HNF4AP41235 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC5.15□□□□□ -1.59
HNF4AP41235 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.15□□□□□ -1.59
HNF4AP41235 WBP1LP8-201ENST00000617401 327 ntBASIC5.15□□□□□ -1.59
HNF4AP41235 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.15□□□□□ -1.59
HNF4AP41235 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.15□□□□□ -1.59
HNF4AP41235 AL118508.4-201ENST00000624142 1176 ntBASIC5.15□□□□□ -1.59
HNF4AP41235 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.59
HNF4AP41235 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
HNF4AP41235 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
HNF4AP41235 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
HNF4AP41235 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.59
HNF4AP41235 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HNF4AP41235 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
HNF4AP41235 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HNF4AP41235 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
HNF4AP41235 AC235565.1-201ENST00000456962 1325 ntBASIC5.15□□□□□ -1.59
HNF4AP41235 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms