Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SOX3P41225 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.8□□□□□ -1.64
SOX3P41225 RNF19BPX-201ENST00000426224 625 ntBASIC4.8□□□□□ -1.64
SOX3P41225 RPS4XP16-201ENST00000427198 791 ntBASIC4.8□□□□□ -1.64
SOX3P41225 EIF2S2P3-201ENST00000428356 999 ntBASIC4.8□□□□□ -1.64
SOX3P41225 AL590762.3-201ENST00000436372 640 ntBASIC4.8□□□□□ -1.64
SOX3P41225 NOP56P2-201ENST00000447491 769 ntBASIC4.8□□□□□ -1.64
SOX3P41225 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.8□□□□□ -1.64
SOX3P41225 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.8□□□□□ -1.64
SOX3P41225 AC092647.2-201ENST00000452998 253 ntBASIC4.8□□□□□ -1.64
SOX3P41225 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.8□□□□□ -1.64
SOX3P41225 TPT1P1-201ENST00000458495 518 ntBASIC4.8□□□□□ -1.64
SOX3P41225 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.8□□□□□ -1.64
SOX3P41225 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SOX3P41225 RPL7AP6-201ENST00000477943 801 ntBASIC4.8□□□□□ -1.64
SOX3P41225 AC090114.3-201ENST00000479267 829 ntBASIC4.8□□□□□ -1.64
SOX3P41225 AC093270.2-201ENST00000486157 792 ntBASIC4.8□□□□□ -1.64
SOX3P41225 RPS24P16-201ENST00000497294 392 ntBASIC4.8□□□□□ -1.64
SOX3P41225 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.8□□□□□ -1.64
SOX3P41225 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.8□□□□□ -1.64
SOX3P41225 AC108157.1-201ENST00000510511 539 ntBASIC4.8□□□□□ -1.64
SOX3P41225 AC006427.1-201ENST00000514359 712 ntBASIC4.8□□□□□ -1.64
SOX3P41225 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.8□□□□□ -1.64
SOX3P41225 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.8□□□□□ -1.64
SOX3P41225 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.8□□□□□ -1.64
SOX3P41225 AC008147.3-201ENST00000548666 354 ntBASIC4.8□□□□□ -1.64
SOX3P41225 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.8□□□□□ -1.64
SOX3P41225 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.8□□□□□ -1.64
SOX3P41225 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.8□□□□□ -1.64
SOX3P41225 MIMT1-201ENST00000597105 1050 ntBASIC4.8□□□□□ -1.64
SOX3P41225 AC087763.1-201ENST00000603391 286 ntBASIC4.8□□□□□ -1.64
SOX3P41225 AC012213.4-201ENST00000606457 354 ntBASIC4.8□□□□□ -1.64
SOX3P41225 RNU6-84P-201ENST00000607737 102 ntBASIC4.8□□□□□ -1.64
SOX3P41225 BX323046.1-201ENST00000610145 535 ntBASIC4.8□□□□□ -1.64
SOX3P41225 AP002371.2-201ENST00000624450 503 ntBASIC4.8□□□□□ -1.64
SOX3P41225 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.8□□□□□ -1.64
SOX3P41225 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SOX3P41225 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.8□□□□□ -1.64
SOX3P41225 PANDAR-201ENST00000629595 1506 ntBASIC4.8□□□□□ -1.64
SOX3P41225 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SOX3P41225 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SOX3P41225 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
SOX3P41225 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SOX3P41225 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SOX3P41225 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
SOX3P41225 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SOX3P41225 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.8□□□□□ -1.64
SOX3P41225 AC020633.1-201ENST00000468439 2247 ntBASIC4.8□□□□□ -1.64
SOX3P41225 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
SOX3P41225 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SOX3P41225 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
SOX3P41225 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.79□□□□□ -1.64
SOX3P41225 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SOX3P41225 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SOX3P41225 MTCO1P7-201ENST00000419523 1542 ntBASIC4.79□□□□□ -1.64
SOX3P41225 AC017079.1-201ENST00000333650 415 ntBASIC4.79□□□□□ -1.64
SOX3P41225 AL645927.1-201ENST00000396783 406 ntBASIC4.79□□□□□ -1.64
SOX3P41225 NUDT19P3-201ENST00000404698 555 ntBASIC4.79□□□□□ -1.64
SOX3P41225 MIR1182-201ENST00000408363 97 ntBASIC4.79□□□□□ -1.64
SOX3P41225 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.79□□□□□ -1.64
SOX3P41225 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.79□□□□□ -1.64
SOX3P41225 AC007394.1-201ENST00000421941 531 ntBASIC4.79□□□□□ -1.64
SOX3P41225 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SOX3P41225 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.79□□□□□ -1.64
SOX3P41225 MGAT2P2-201ENST00000427194 797 ntBASIC4.79□□□□□ -1.64
SOX3P41225 AL161722.2-201ENST00000434731 981 ntBASIC4.79□□□□□ -1.64
SOX3P41225 AC046176.1-201ENST00000435260 1170 ntBASIC4.79□□□□□ -1.64
SOX3P41225 GAPDHP58-201ENST00000438477 1006 ntBASIC4.79□□□□□ -1.64
SOX3P41225 AC074367.1-201ENST00000438685 1125 ntBASIC4.79□□□□□ -1.64
SOX3P41225 CYCSP24-201ENST00000445119 316 ntBASIC4.79□□□□□ -1.64
SOX3P41225 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.79□□□□□ -1.64
SOX3P41225 AC073850.1-201ENST00000449243 255 ntBASIC4.79□□□□□ -1.64
SOX3P41225 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
SOX3P41225 AL353718.1-201ENST00000451028 517 ntBASIC4.79□□□□□ -1.64
SOX3P41225 CYCSP53-201ENST00000455540 265 ntBASIC4.79□□□□□ -1.64
SOX3P41225 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.79□□□□□ -1.64
SOX3P41225 RN7SL189P-201ENST00000468631 289 ntBASIC4.79□□□□□ -1.64
SOX3P41225 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.79□□□□□ -1.64
SOX3P41225 AC004453.1-201ENST00000487895 408 ntBASIC4.79□□□□□ -1.64
SOX3P41225 AC109462.1-201ENST00000491087 368 ntBASIC4.79□□□□□ -1.64
SOX3P41225 RFPL4AP3-201ENST00000515267 345 ntBASIC4.79□□□□□ -1.64
SOX3P41225 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SOX3P41225 SNORA26.10-201ENST00000516427 141 ntBASIC4.79□□□□□ -1.64
SOX3P41225 RN7SKP66-201ENST00000516681 231 ntBASIC4.79□□□□□ -1.64
SOX3P41225 MTND1P36-201ENST00000522384 936 ntBASIC4.79□□□□□ -1.64
SOX3P41225 OR4V1P-201ENST00000525394 1140 ntBASIC4.79□□□□□ -1.64
SOX3P41225 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.79□□□□□ -1.64
SOX3P41225 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.79□□□□□ -1.64
SOX3P41225 AP002373.2-201ENST00000541631 1060 ntBASIC4.79□□□□□ -1.64
SOX3P41225 AC092490.3-201ENST00000545370 572 ntBASIC4.79□□□□□ -1.64
SOX3P41225 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.79□□□□□ -1.64
SOX3P41225 AC092868.3-201ENST00000560515 784 ntBASIC4.79□□□□□ -1.64
SOX3P41225 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.79□□□□□ -1.64
SOX3P41225 MTND4LP25-201ENST00000570218 163 ntBASIC4.79□□□□□ -1.64
SOX3P41225 MTND2P13-201ENST00000577438 1039 ntBASIC4.79□□□□□ -1.64
SOX3P41225 RN7SL708P-201ENST00000580952 299 ntBASIC4.79□□□□□ -1.64
SOX3P41225 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.79□□□□□ -1.64
SOX3P41225 MIR3936-201ENST00000584304 110 ntBASIC4.79□□□□□ -1.64
SOX3P41225 MIR4443-201ENST00000585052 53 ntBASIC4.79□□□□□ -1.64
SOX3P41225 AC011626.1-201ENST00000604710 562 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms