Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RORAP35398 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
RORAP35398 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RORAP35398 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
RORAP35398 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.87□□□□□ -1.63
RORAP35398 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RORAP35398 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RORAP35398 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
RORAP35398 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.87□□□□□ -1.63
RORAP35398 RPL34P6-201ENST00000432390 345 ntBASIC4.87□□□□□ -1.63
RORAP35398 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.87□□□□□ -1.63
RORAP35398 RPL34P20-201ENST00000442771 351 ntBASIC4.87□□□□□ -1.63
RORAP35398 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.87□□□□□ -1.63
RORAP35398 RPS3AP41-201ENST00000462701 778 ntBASIC4.87□□□□□ -1.63
RORAP35398 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.87□□□□□ -1.63
RORAP35398 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.87□□□□□ -1.63
RORAP35398 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.87□□□□□ -1.63
RORAP35398 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.87□□□□□ -1.63
RORAP35398 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.87□□□□□ -1.63
RORAP35398 AC130364.2-201ENST00000528639 604 ntBASIC4.87□□□□□ -1.63
RORAP35398 BRD9P1-201ENST00000529855 560 ntBASIC4.87□□□□□ -1.63
RORAP35398 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
RORAP35398 PCNPP1-201ENST00000552501 511 ntBASIC4.87□□□□□ -1.63
RORAP35398 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.87□□□□□ -1.63
RORAP35398 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC4.87□□□□□ -1.63
RORAP35398 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.87□□□□□ -1.63
RORAP35398 AC127024.5-201ENST00000580085 462 ntBASIC4.87□□□□□ -1.63
RORAP35398 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.87□□□□□ -1.63
RORAP35398 VN1R81P-201ENST00000602085 372 ntBASIC4.87□□□□□ -1.63
RORAP35398 AP005432.2-201ENST00000608162 586 ntBASIC4.87□□□□□ -1.63
RORAP35398 FAM25E-202ENST00000608562 189 ntBASIC4.87□□□□□ -1.63
RORAP35398 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.87□□□□□ -1.63
RORAP35398 AC022960.2-201ENST00000616300 666 ntBASIC4.87□□□□□ -1.63
RORAP35398 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.87□□□□□ -1.63
RORAP35398 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.87□□□□□ -1.63
RORAP35398 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.87□□□□□ -1.63
RORAP35398 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RORAP35398 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
RORAP35398 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
RORAP35398 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
RORAP35398 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.87□□□□□ -1.63
RORAP35398 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
RORAP35398 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RORAP35398 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RORAP35398 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
RORAP35398 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
RORAP35398 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
RORAP35398 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.86□□□□□ -1.63
RORAP35398 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.86□□□□□ -1.63
RORAP35398 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RORAP35398 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RORAP35398 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.86□□□□□ -1.63
RORAP35398 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
RORAP35398 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.86□□□□□ -1.63
RORAP35398 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RORAP35398 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RORAP35398 RNA5SP223-201ENST00000365174 120 ntBASIC4.86□□□□□ -1.63
RORAP35398 RNA5SP455-201ENST00000365190 119 ntBASIC4.86□□□□□ -1.63
RORAP35398 AL139128.1-201ENST00000413921 941 ntBASIC4.86□□□□□ -1.63
RORAP35398 VN1R31P-201ENST00000417498 730 ntBASIC4.86□□□□□ -1.63
RORAP35398 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.86□□□□□ -1.63
RORAP35398 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.86□□□□□ -1.63
RORAP35398 AL450263.2-201ENST00000439400 589 ntBASIC4.86□□□□□ -1.63
RORAP35398 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.86□□□□□ -1.63
RORAP35398 RPL31P44-201ENST00000447680 377 ntBASIC4.86□□□□□ -1.63
RORAP35398 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.86□□□□□ -1.63
RORAP35398 AL049874.2-201ENST00000492636 288 ntBASIC4.86□□□□□ -1.63
RORAP35398 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.86□□□□□ -1.63
RORAP35398 AC097173.1-201ENST00000505862 819 ntBASIC4.86□□□□□ -1.63
RORAP35398 AC098976.1-201ENST00000513014 541 ntBASIC4.86□□□□□ -1.63
RORAP35398 CDH12P4-201ENST00000517835 295 ntBASIC4.86□□□□□ -1.63
RORAP35398 CDH12P3-201ENST00000517935 295 ntBASIC4.86□□□□□ -1.63
RORAP35398 CDH12P1-201ENST00000518435 295 ntBASIC4.86□□□□□ -1.63
RORAP35398 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.86□□□□□ -1.63
RORAP35398 AC092709.1-201ENST00000521355 1045 ntBASIC4.86□□□□□ -1.63
RORAP35398 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.86□□□□□ -1.63
RORAP35398 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.86□□□□□ -1.63
RORAP35398 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.86□□□□□ -1.63
RORAP35398 AC234775.3-201ENST00000564612 656 ntBASIC4.86□□□□□ -1.63
RORAP35398 CD24P2-201ENST00000565486 219 ntBASIC4.86□□□□□ -1.63
RORAP35398 MIR3934-201ENST00000579806 107 ntBASIC4.86□□□□□ -1.63
RORAP35398 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.86□□□□□ -1.63
RORAP35398 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.86□□□□□ -1.63
RORAP35398 AC005084.1-201ENST00000605160 304 ntBASIC4.86□□□□□ -1.63
RORAP35398 AL135786.2-201ENST00000608422 615 ntBASIC4.86□□□□□ -1.63
RORAP35398 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
RORAP35398 AC087385.3-201ENST00000620477 187 ntBASIC4.86□□□□□ -1.63
RORAP35398 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.86□□□□□ -1.63
RORAP35398 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.86□□□□□ -1.63
RORAP35398 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RORAP35398 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.86□□□□□ -1.63
RORAP35398 AC123912.3-201ENST00000600907 1367 ntBASIC4.86□□□□□ -1.63
RORAP35398 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.86□□□□□ -1.63
RORAP35398 AC004817.4-201ENST00000602396 3625 ntBASIC4.86□□□□□ -1.63
RORAP35398 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.86□□□□□ -1.63
RORAP35398 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.86□□□□□ -1.63
RORAP35398 AC007996.1-201ENST00000620414 2821 ntBASIC4.86□□□□□ -1.63
RORAP35398 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.86□□□□□ -1.63
RORAP35398 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
RORAP35398 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms