Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AC112191.2-201ENST00000522428 333 ntBASIC5.44□□□□□ -1.54
CTNNA1P35221 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.44□□□□□ -1.54
CTNNA1P35221 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.44□□□□□ -1.54
CTNNA1P35221 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.44□□□□□ -1.54
CTNNA1P35221 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
CTNNA1P35221 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
CTNNA1P35221 NPM1P47-201ENST00000560843 856 ntBASIC5.44□□□□□ -1.54
CTNNA1P35221 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CTNNA1P35221 SS18L2P2-201ENST00000583960 235 ntBASIC5.44□□□□□ -1.54
CTNNA1P35221 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.44□□□□□ -1.54
CTNNA1P35221 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.44□□□□□ -1.54
CTNNA1P35221 RNA5SP440-201ENST00000612665 119 ntBASIC5.44□□□□□ -1.54
CTNNA1P35221 AC092747.4-201ENST00000620519 1861 ntBASIC5.44□□□□□ -1.54
CTNNA1P35221 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.44□□□□□ -1.54
CTNNA1P35221 AC093535.2-201ENST00000624769 2326 ntBASIC5.44□□□□□ -1.54
CTNNA1P35221 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.44□□□□□ -1.54
CTNNA1P35221 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CTNNA1P35221 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CTNNA1P35221 AC090971.4-201ENST00000560291 1800 ntBASIC5.44□□□□□ -1.54
CTNNA1P35221 OR55B1P-203ENST00000641518 2602 ntBASIC5.44□□□□□ -1.54
CTNNA1P35221 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CTNNA1P35221 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CTNNA1P35221 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CTNNA1P35221 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.43□□□□□ -1.54
CTNNA1P35221 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CTNNA1P35221 AC011447.7-201ENST00000624228 1590 ntBASIC5.43□□□□□ -1.54
CTNNA1P35221 AL022322.2-201ENST00000624072 20397 ntBASIC5.43□□□□□ -1.54
CTNNA1P35221 AC009229.4-201ENST00000623854 1947 ntBASIC5.43□□□□□ -1.54
CTNNA1P35221 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CTNNA1P35221 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CTNNA1P35221 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CTNNA1P35221 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CTNNA1P35221 AC011155.1-201ENST00000316512 456 ntBASIC5.43□□□□□ -1.54
CTNNA1P35221 RNA5SP510-201ENST00000364697 99 ntBASIC5.43□□□□□ -1.54
CTNNA1P35221 RNA5SP90-201ENST00000364801 99 ntBASIC5.43□□□□□ -1.54
CTNNA1P35221 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CTNNA1P35221 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CTNNA1P35221 RNA5SP498-201ENST00000411342 120 ntBASIC5.43□□□□□ -1.54
CTNNA1P35221 RNU6-603P-201ENST00000411403 107 ntBASIC5.43□□□□□ -1.54
CTNNA1P35221 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.43□□□□□ -1.54
CTNNA1P35221 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.43□□□□□ -1.54
CTNNA1P35221 RPS11P7-201ENST00000442125 465 ntBASIC5.43□□□□□ -1.54
CTNNA1P35221 AP000281.1-201ENST00000444036 316 ntBASIC5.43□□□□□ -1.54
CTNNA1P35221 RPL7P6-201ENST00000480903 738 ntBASIC5.43□□□□□ -1.54
CTNNA1P35221 AC005912.1-201ENST00000495392 255 ntBASIC5.43□□□□□ -1.54
CTNNA1P35221 RPEP1-201ENST00000504507 658 ntBASIC5.43□□□□□ -1.54
CTNNA1P35221 HMGB3P16-201ENST00000508037 287 ntBASIC5.43□□□□□ -1.54
CTNNA1P35221 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CTNNA1P35221 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.43□□□□□ -1.54
CTNNA1P35221 AL133247.2-201ENST00000603236 482 ntBASIC5.43□□□□□ -1.54
CTNNA1P35221 AL049844.2-201ENST00000604280 628 ntBASIC5.43□□□□□ -1.54
CTNNA1P35221 BNIP3P35-201ENST00000604530 490 ntBASIC5.43□□□□□ -1.54
CTNNA1P35221 AC010200.2-201ENST00000605098 235 ntBASIC5.43□□□□□ -1.54
CTNNA1P35221 AC116447.1-201ENST00000613153 453 ntBASIC5.43□□□□□ -1.54
CTNNA1P35221 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.43□□□□□ -1.54
CTNNA1P35221 uc_338.9-201ENST00000617424 182 ntBASIC5.43□□□□□ -1.54
CTNNA1P35221 AC009032.1-201ENST00000617574 431 ntBASIC5.43□□□□□ -1.54
CTNNA1P35221 AC015914.2-201ENST00000618167 288 ntBASIC5.43□□□□□ -1.54
CTNNA1P35221 MIR8080-201ENST00000622224 89 ntBASIC5.43□□□□□ -1.54
CTNNA1P35221 AP001962.1-201ENST00000624114 559 ntBASIC5.43□□□□□ -1.54
CTNNA1P35221 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CTNNA1P35221 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.43□□□□□ -1.54
CTNNA1P35221 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.43□□□□□ -1.54
CTNNA1P35221 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CTNNA1P35221 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CTNNA1P35221 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.43□□□□□ -1.54
CTNNA1P35221 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CTNNA1P35221 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CTNNA1P35221 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CTNNA1P35221 AC104260.2-201ENST00000623551 3497 ntBASIC5.43□□□□□ -1.54
CTNNA1P35221 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
CTNNA1P35221 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CTNNA1P35221 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CTNNA1P35221 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CTNNA1P35221 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CTNNA1P35221 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
CTNNA1P35221 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.42□□□□□ -1.54
CTNNA1P35221 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CTNNA1P35221 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.42□□□□□ -1.54
CTNNA1P35221 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CTNNA1P35221 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.42□□□□□ -1.54
CTNNA1P35221 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
CTNNA1P35221 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CTNNA1P35221 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.42□□□□□ -1.54
CTNNA1P35221 U3.3-201ENST00000362986 216 ntBASIC5.42□□□□□ -1.54
CTNNA1P35221 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.42□□□□□ -1.54
CTNNA1P35221 AL035079.1-201ENST00000405210 287 ntBASIC5.42□□□□□ -1.54
CTNNA1P35221 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.42□□□□□ -1.54
CTNNA1P35221 RPL24P2-201ENST00000421023 475 ntBASIC5.42□□□□□ -1.54
CTNNA1P35221 DPY19L1P2-201ENST00000426647 915 ntBASIC5.42□□□□□ -1.54
CTNNA1P35221 KCTD9P1-201ENST00000430462 1167 ntBASIC5.42□□□□□ -1.54
CTNNA1P35221 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.42□□□□□ -1.54
CTNNA1P35221 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.42□□□□□ -1.54
CTNNA1P35221 RPL35AP21-201ENST00000437667 333 ntBASIC5.42□□□□□ -1.54
CTNNA1P35221 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.42□□□□□ -1.54
CTNNA1P35221 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.42□□□□□ -1.54
CTNNA1P35221 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.42□□□□□ -1.54
CTNNA1P35221 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.42□□□□□ -1.54
CTNNA1P35221 AC108120.2-201ENST00000512973 294 ntBASIC5.42□□□□□ -1.54
CTNNA1P35221 AC008083.2-201ENST00000546707 476 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms