Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC13P31276 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
HOXC13P31276 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.52□□□□□ -1.53
HOXC13P31276 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.52□□□□□ -1.53
HOXC13P31276 AC137768.1-201ENST00000549998 553 ntBASIC5.52□□□□□ -1.53
HOXC13P31276 CR383656.6-201ENST00000550518 394 ntBASIC5.52□□□□□ -1.53
HOXC13P31276 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.52□□□□□ -1.53
HOXC13P31276 AC068714.1-201ENST00000559623 800 ntBASIC5.52□□□□□ -1.53
HOXC13P31276 NMNAT1P5-201ENST00000559657 841 ntBASIC5.52□□□□□ -1.53
HOXC13P31276 AC104785.1-201ENST00000603220 588 ntBASIC5.52□□□□□ -1.53
HOXC13P31276 AL022394.1-201ENST00000606979 292 ntBASIC5.52□□□□□ -1.53
HOXC13P31276 RNA5SP439-201ENST00000617595 124 ntBASIC5.52□□□□□ -1.53
HOXC13P31276 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.52□□□□□ -1.53
HOXC13P31276 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC13P31276 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
HOXC13P31276 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC13P31276 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC13P31276 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC13P31276 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
HOXC13P31276 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.52□□□□□ -1.53
HOXC13P31276 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC13P31276 CASC19-221ENST00000641309 1382 ntBASIC5.52□□□□□ -1.53
HOXC13P31276 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC13P31276 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
HOXC13P31276 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC13P31276 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HOXC13P31276 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
HOXC13P31276 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
HOXC13P31276 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HOXC13P31276 ZNF733P-202ENST00000444809 1573 ntBASIC5.51□□□□□ -1.53
HOXC13P31276 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.51□□□□□ -1.53
HOXC13P31276 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.51□□□□□ -1.53
HOXC13P31276 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
HOXC13P31276 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.51□□□□□ -1.53
HOXC13P31276 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HOXC13P31276 EIF4A1P3-201ENST00000411521 244 ntBASIC5.51□□□□□ -1.53
HOXC13P31276 GPS2P1-201ENST00000411761 986 ntBASIC5.51□□□□□ -1.53
HOXC13P31276 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.51□□□□□ -1.53
HOXC13P31276 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HOXC13P31276 RPL7AP49-201ENST00000429522 581 ntBASIC5.51□□□□□ -1.53
HOXC13P31276 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.51□□□□□ -1.53
HOXC13P31276 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.51□□□□□ -1.53
HOXC13P31276 AL591438.1-201ENST00000433508 581 ntBASIC5.51□□□□□ -1.53
HOXC13P31276 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.51□□□□□ -1.53
HOXC13P31276 AC006466.1-201ENST00000438721 289 ntBASIC5.51□□□□□ -1.53
HOXC13P31276 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.51□□□□□ -1.53
HOXC13P31276 AC092647.3-201ENST00000443044 633 ntBASIC5.51□□□□□ -1.53
HOXC13P31276 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.51□□□□□ -1.53
HOXC13P31276 RPS3AP41-201ENST00000462701 778 ntBASIC5.51□□□□□ -1.53
HOXC13P31276 AC009127.1-201ENST00000467090 155 ntBASIC5.51□□□□□ -1.53
HOXC13P31276 RN7SL459P-201ENST00000481078 302 ntBASIC5.51□□□□□ -1.53
HOXC13P31276 RN7SL423P-201ENST00000486202 304 ntBASIC5.51□□□□□ -1.53
HOXC13P31276 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.51□□□□□ -1.53
HOXC13P31276 OR51K1P-201ENST00000510214 950 ntBASIC5.51□□□□□ -1.53
HOXC13P31276 HMGN1P9-201ENST00000515212 298 ntBASIC5.51□□□□□ -1.53
HOXC13P31276 AC097486.1-201ENST00000515331 210 ntBASIC5.51□□□□□ -1.53
HOXC13P31276 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HOXC13P31276 AP000676.2-201ENST00000529711 301 ntBASIC5.51□□□□□ -1.53
HOXC13P31276 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.51□□□□□ -1.53
HOXC13P31276 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.51□□□□□ -1.53
HOXC13P31276 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.51□□□□□ -1.53
HOXC13P31276 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HOXC13P31276 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.51□□□□□ -1.53
HOXC13P31276 AC087283.1-201ENST00000604029 1074 ntBASIC5.51□□□□□ -1.53
HOXC13P31276 AC009163.6-201ENST00000612367 342 ntBASIC5.51□□□□□ -1.53
HOXC13P31276 AL731566.2-201ENST00000618971 317 ntBASIC5.51□□□□□ -1.53
HOXC13P31276 MIR7703-201ENST00000620784 77 ntBASIC5.51□□□□□ -1.53
HOXC13P31276 AC104820.1-201ENST00000624183 307 ntBASIC5.51□□□□□ -1.53
HOXC13P31276 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
HOXC13P31276 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HOXC13P31276 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HOXC13P31276 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
HOXC13P31276 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.51□□□□□ -1.53
HOXC13P31276 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.51□□□□□ -1.53
HOXC13P31276 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.5□□□□□ -1.53
HOXC13P31276 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
HOXC13P31276 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HOXC13P31276 MAPK10-304ENST00000641341 3984 ntBASIC5.5□□□□□ -1.53
HOXC13P31276 HSPA8P18-201ENST00000439846 1928 ntBASIC5.5□□□□□ -1.53
HOXC13P31276 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
HOXC13P31276 CASC19-260ENST00000641828 2001 ntBASIC5.5□□□□□ -1.53
HOXC13P31276 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HOXC13P31276 AC114947.2-201ENST00000565748 2125 ntBASIC5.5□□□□□ -1.53
HOXC13P31276 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HOXC13P31276 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HOXC13P31276 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.5□□□□□ -1.53
HOXC13P31276 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HOXC13P31276 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.5□□□□□ -1.53
HOXC13P31276 AC079298.1-201ENST00000625026 1619 ntBASIC5.5□□□□□ -1.53
HOXC13P31276 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.5□□□□□ -1.53
HOXC13P31276 SNORA48.4-201ENST00000391089 134 ntBASIC5.5□□□□□ -1.53
HOXC13P31276 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.5□□□□□ -1.53
HOXC13P31276 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.5□□□□□ -1.53
HOXC13P31276 AC006065.1-201ENST00000422539 802 ntBASIC5.5□□□□□ -1.53
HOXC13P31276 RNF19BPX-201ENST00000426224 625 ntBASIC5.5□□□□□ -1.53
HOXC13P31276 AC092017.2-201ENST00000427600 362 ntBASIC5.5□□□□□ -1.53
HOXC13P31276 HSPD1P12-201ENST00000429127 1069 ntBASIC5.5□□□□□ -1.53
HOXC13P31276 MTCO3P21-201ENST00000430791 643 ntBASIC5.5□□□□□ -1.53
HOXC13P31276 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.5□□□□□ -1.53
HOXC13P31276 GSTA7P-201ENST00000438425 448 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms