Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 AL159169.2-201ENST00000610061 1269 ntBASIC5.7□□□□□ -1.5
HOXA13P31271 AC105105.5-201ENST00000622635 1294 ntBASIC5.7□□□□□ -1.5
HOXA13P31271 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
HOXA13P31271 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
HOXA13P31271 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.7□□□□□ -1.5
HOXA13P31271 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXA13P31271 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXA13P31271 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HOXA13P31271 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXA13P31271 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.69□□□□□ -1.5
HOXA13P31271 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXA13P31271 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
HOXA13P31271 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.69□□□□□ -1.5
HOXA13P31271 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXA13P31271 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
HOXA13P31271 RNA5SP191-201ENST00000362585 102 ntBASIC5.69□□□□□ -1.5
HOXA13P31271 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXA13P31271 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
HOXA13P31271 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
HOXA13P31271 AL021331.1-201ENST00000402817 582 ntBASIC5.69□□□□□ -1.5
HOXA13P31271 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.69□□□□□ -1.5
HOXA13P31271 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.69□□□□□ -1.5
HOXA13P31271 AC093414.1-201ENST00000434712 514 ntBASIC5.69□□□□□ -1.5
HOXA13P31271 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.69□□□□□ -1.5
HOXA13P31271 AL450023.3-201ENST00000440592 271 ntBASIC5.69□□□□□ -1.5
HOXA13P31271 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.69□□□□□ -1.5
HOXA13P31271 OR52J1P-201ENST00000450596 932 ntBASIC5.69□□□□□ -1.5
HOXA13P31271 OR52E3P-201ENST00000452083 936 ntBASIC5.69□□□□□ -1.5
HOXA13P31271 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXA13P31271 AC063943.1-201ENST00000465434 453 ntBASIC5.69□□□□□ -1.5
HOXA13P31271 RPS23P1-201ENST00000491662 432 ntBASIC5.69□□□□□ -1.5
HOXA13P31271 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.69□□□□□ -1.5
HOXA13P31271 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.69□□□□□ -1.5
HOXA13P31271 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXA13P31271 EDDM3DP-201ENST00000554692 434 ntBASIC5.69□□□□□ -1.5
HOXA13P31271 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.69□□□□□ -1.5
HOXA13P31271 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.69□□□□□ -1.5
HOXA13P31271 AC006213.4-201ENST00000616184 634 ntBASIC5.69□□□□□ -1.5
HOXA13P31271 AC091932.2-201ENST00000623014 291 ntBASIC5.69□□□□□ -1.5
HOXA13P31271 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.69□□□□□ -1.5
HOXA13P31271 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXA13P31271 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.69□□□□□ -1.5
HOXA13P31271 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXA13P31271 AC099654.2-201ENST00000433031 1980 ntBASIC5.69□□□□□ -1.5
HOXA13P31271 AC004817.4-201ENST00000602396 3625 ntBASIC5.69□□□□□ -1.5
HOXA13P31271 MTND5P23-201ENST00000430812 1655 ntBASIC5.69□□□□□ -1.5
HOXA13P31271 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXA13P31271 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXA13P31271 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HOXA13P31271 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXA13P31271 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXA13P31271 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXA13P31271 SAMMSON-226ENST00000642089 1582 ntBASIC5.68□□□□□ -1.5
HOXA13P31271 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXA13P31271 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
HOXA13P31271 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
HOXA13P31271 DDX6P1-205ENST00000441966 1436 ntBASIC5.68□□□□□ -1.5
HOXA13P31271 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXA13P31271 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.68□□□□□ -1.5
HOXA13P31271 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXA13P31271 LRRC37BP1-201ENST00000398851 714 ntBASIC5.68□□□□□ -1.5
HOXA13P31271 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
HOXA13P31271 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXA13P31271 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXA13P31271 FAR1P1-201ENST00000427163 934 ntBASIC5.68□□□□□ -1.5
HOXA13P31271 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXA13P31271 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXA13P31271 MTND4LP14-201ENST00000429447 288 ntBASIC5.68□□□□□ -1.5
HOXA13P31271 AC073648.4-201ENST00000442655 781 ntBASIC5.68□□□□□ -1.5
HOXA13P31271 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXA13P31271 AC004980.3-201ENST00000447046 365 ntBASIC5.68□□□□□ -1.5
HOXA13P31271 AC017099.1-201ENST00000448261 1028 ntBASIC5.68□□□□□ -1.5
HOXA13P31271 AL691482.1-201ENST00000453255 87 ntBASIC5.68□□□□□ -1.5
HOXA13P31271 AC239798.3-201ENST00000454459 408 ntBASIC5.68□□□□□ -1.5
HOXA13P31271 AC098583.1-201ENST00000480875 255 ntBASIC5.68□□□□□ -1.5
HOXA13P31271 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXA13P31271 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.68□□□□□ -1.5
HOXA13P31271 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXA13P31271 RNU6-491P-201ENST00000516099 110 ntBASIC5.68□□□□□ -1.5
HOXA13P31271 RNA5SP392-201ENST00000516905 112 ntBASIC5.68□□□□□ -1.5
HOXA13P31271 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.68□□□□□ -1.5
HOXA13P31271 NDUFB4P11-201ENST00000560510 395 ntBASIC5.68□□□□□ -1.5
HOXA13P31271 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXA13P31271 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXA13P31271 AL592494.3-201ENST00000609485 464 ntBASIC5.68□□□□□ -1.5
HOXA13P31271 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXA13P31271 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXA13P31271 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXA13P31271 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
HOXA13P31271 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXA13P31271 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXA13P31271 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXA13P31271 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXA13P31271 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
HOXA13P31271 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXA13P31271 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXA13P31271 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.67□□□□□ -1.5
HOXA13P31271 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXA13P31271 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXA13P31271 AL022311.1-201ENST00000623726 19416 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms