Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 RN7SKP114-201ENST00000410327 279 ntBASIC3.79□□□□□ -1.8
HLA-DMBP28068 RN7SKP126-201ENST00000411143 300 ntBASIC3.79□□□□□ -1.8
HLA-DMBP28068 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DMBP28068 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC3.79□□□□□ -1.8
HLA-DMBP28068 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC3.79□□□□□ -1.8
HLA-DMBP28068 RPS27P18-201ENST00000431701 247 ntBASIC3.79□□□□□ -1.8
HLA-DMBP28068 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DMBP28068 ARAFP2-201ENST00000440565 559 ntBASIC3.79□□□□□ -1.8
HLA-DMBP28068 AL450023.3-201ENST00000440592 271 ntBASIC3.79□□□□□ -1.8
HLA-DMBP28068 HMGB1P4-201ENST00000455362 567 ntBASIC3.79□□□□□ -1.8
HLA-DMBP28068 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DMBP28068 AC090686.1-201ENST00000481577 749 ntBASIC3.79□□□□□ -1.8
HLA-DMBP28068 AC008410.1-201ENST00000483777 339 ntBASIC3.79□□□□□ -1.8
HLA-DMBP28068 SNRPCP2-201ENST00000504370 475 ntBASIC3.79□□□□□ -1.8
HLA-DMBP28068 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC3.79□□□□□ -1.8
HLA-DMBP28068 RNA5SP303-201ENST00000516192 130 ntBASIC3.79□□□□□ -1.8
HLA-DMBP28068 RNA5SP360-201ENST00000516555 118 ntBASIC3.79□□□□□ -1.8
HLA-DMBP28068 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DMBP28068 MAL2-208ENST00000523307 556 ntTSL 4 BASIC3.79□□□□□ -1.8
HLA-DMBP28068 AC012339.2-201ENST00000523996 453 ntBASIC3.79□□□□□ -1.8
HLA-DMBP28068 BMPR1APS2-201ENST00000527904 1012 ntBASIC3.79□□□□□ -1.8
HLA-DMBP28068 HNRNPRP2-201ENST00000528421 743 ntBASIC3.79□□□□□ -1.8
HLA-DMBP28068 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DMBP28068 AC022882.1-201ENST00000532142 501 ntBASIC3.79□□□□□ -1.8
HLA-DMBP28068 AC024940.3-201ENST00000538551 316 ntBASIC3.79□□□□□ -1.8
HLA-DMBP28068 AC008126.1-201ENST00000549019 480 ntBASIC3.79□□□□□ -1.8
HLA-DMBP28068 OR11J2P-201ENST00000555298 907 ntBASIC3.79□□□□□ -1.8
HLA-DMBP28068 AC084759.1-201ENST00000561168 290 ntBASIC3.79□□□□□ -1.8
HLA-DMBP28068 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DMBP28068 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC3.79□□□□□ -1.8
HLA-DMBP28068 AC095055.1-201ENST00000603472 1113 ntBASIC3.79□□□□□ -1.8
HLA-DMBP28068 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DMBP28068 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC3.79□□□□□ -1.8
HLA-DMBP28068 AC090527.3-201ENST00000619041 548 ntBASIC3.79□□□□□ -1.8
HLA-DMBP28068 AC020763.5-201ENST00000623298 430 ntBASIC3.79□□□□□ -1.8
HLA-DMBP28068 AL596275.2-204ENST00000641628 552 ntBASIC3.79□□□□□ -1.8
HLA-DMBP28068 AL596275.2-206ENST00000641957 626 ntBASIC3.79□□□□□ -1.8
HLA-DMBP28068 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DMBP28068 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC3.79□□□□□ -1.8
HLA-DMBP28068 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC3.79□□□□□ -1.8
HLA-DMBP28068 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DMBP28068 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC3.79□□□□□ -1.8
HLA-DMBP28068 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC3.79□□□□□ -1.8
HLA-DMBP28068 PANDAR-201ENST00000629595 1506 ntBASIC3.79□□□□□ -1.8
HLA-DMBP28068 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
HLA-DMBP28068 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC3.79□□□□□ -1.8
HLA-DMBP28068 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DMBP28068 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.79□□□□□ -1.8
HLA-DMBP28068 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DMBP28068 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC3.79□□□□□ -1.8
HLA-DMBP28068 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
HLA-DMBP28068 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DMBP28068 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
HLA-DMBP28068 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DMBP28068 AC126323.6-202ENST00000568092 3511 ntBASIC3.78□□□□□ -1.8
HLA-DMBP28068 MTCO1P22-201ENST00000604619 1360 ntBASIC3.78□□□□□ -1.8
HLA-DMBP28068 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DMBP28068 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC3.78□□□□□ -1.8
HLA-DMBP28068 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DMBP28068 ALB-214ENST00000509063 1911 ntTSL 5 BASIC3.78□□□□□ -1.8
HLA-DMBP28068 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC3.78□□□□□ -1.8
HLA-DMBP28068 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DMBP28068 AL929601.4-201ENST00000613011 1341 ntBASIC3.78□□□□□ -1.8
HLA-DMBP28068 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DMBP28068 SNORA58B-201ENST00000364259 136 ntBASIC3.78□□□□□ -1.8
HLA-DMBP28068 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
HLA-DMBP28068 MIR137-201ENST00000385223 102 ntBASIC3.78□□□□□ -1.8
HLA-DMBP28068 AL645927.1-201ENST00000396783 406 ntBASIC3.78□□□□□ -1.8
HLA-DMBP28068 LRRC37BP1-201ENST00000398851 714 ntBASIC3.78□□□□□ -1.8
HLA-DMBP28068 NUDT19P3-201ENST00000404698 555 ntBASIC3.78□□□□□ -1.8
HLA-DMBP28068 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC3.78□□□□□ -1.8
HLA-DMBP28068 AC006455.6-201ENST00000426192 893 ntBASIC3.78□□□□□ -1.8
HLA-DMBP28068 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DMBP28068 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC3.78□□□□□ -1.8
HLA-DMBP28068 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC3.78□□□□□ -1.8
HLA-DMBP28068 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DMBP28068 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DMBP28068 TCEA1P1-201ENST00000449716 880 ntBASIC3.78□□□□□ -1.8
HLA-DMBP28068 RPL7AP6-201ENST00000477943 801 ntBASIC3.78□□□□□ -1.8
HLA-DMBP28068 RPL7AP10-201ENST00000481016 791 ntBASIC3.78□□□□□ -1.8
HLA-DMBP28068 AC004453.1-201ENST00000487895 408 ntBASIC3.78□□□□□ -1.8
HLA-DMBP28068 RN7SL441P-201ENST00000492388 296 ntBASIC3.78□□□□□ -1.8
HLA-DMBP28068 AC073073.1-201ENST00000493920 463 ntBASIC3.78□□□□□ -1.8
HLA-DMBP28068 RN7SL808P-201ENST00000496066 299 ntBASIC3.78□□□□□ -1.8
HLA-DMBP28068 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DMBP28068 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC3.78□□□□□ -1.8
HLA-DMBP28068 RNA5SP249-201ENST00000516127 99 ntBASIC3.78□□□□□ -1.8
HLA-DMBP28068 RN7SKP66-201ENST00000516681 231 ntBASIC3.78□□□□□ -1.8
HLA-DMBP28068 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DMBP28068 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DMBP28068 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC3.78□□□□□ -1.8
HLA-DMBP28068 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DMBP28068 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC3.78□□□□□ -1.8
HLA-DMBP28068 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DMBP28068 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC3.78□□□□□ -1.8
HLA-DMBP28068 AC116553.2-201ENST00000564203 463 ntBASIC3.78□□□□□ -1.8
HLA-DMBP28068 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DMBP28068 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC3.78□□□□□ -1.8
HLA-DMBP28068 AC008536.1-201ENST00000602872 669 ntBASIC3.78□□□□□ -1.8
HLA-DMBP28068 AC233280.2-201ENST00000603917 1070 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms