Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DMAP28067 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DMAP28067 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.28□□□□□ -1.72
HLA-DMAP28067 RNU2-50P-201ENST00000410494 143 ntBASIC4.28□□□□□ -1.72
HLA-DMAP28067 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.28□□□□□ -1.72
HLA-DMAP28067 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.28□□□□□ -1.72
HLA-DMAP28067 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.28□□□□□ -1.72
HLA-DMAP28067 TXNP5-201ENST00000441043 315 ntBASIC4.28□□□□□ -1.72
HLA-DMAP28067 RPS11P7-201ENST00000442125 465 ntBASIC4.28□□□□□ -1.72
HLA-DMAP28067 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DMAP28067 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.28□□□□□ -1.72
HLA-DMAP28067 RN7SL51P-201ENST00000468230 285 ntBASIC4.28□□□□□ -1.72
HLA-DMAP28067 AC025445.1-201ENST00000502728 300 ntBASIC4.28□□□□□ -1.72
HLA-DMAP28067 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.28□□□□□ -1.72
HLA-DMAP28067 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DMAP28067 RNA5SP154-201ENST00000516193 111 ntBASIC4.28□□□□□ -1.72
HLA-DMAP28067 RNA5SP271-201ENST00000516700 88 ntBASIC4.28□□□□□ -1.72
HLA-DMAP28067 RNA5SP373-201ENST00000517271 95 ntBASIC4.28□□□□□ -1.72
HLA-DMAP28067 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DMAP28067 AC107958.1-201ENST00000556576 290 ntBASIC4.28□□□□□ -1.72
HLA-DMAP28067 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.28□□□□□ -1.72
HLA-DMAP28067 AC026826.3-201ENST00000561747 158 ntBASIC4.28□□□□□ -1.72
HLA-DMAP28067 AL121834.1-201ENST00000572284 509 ntBASIC4.28□□□□□ -1.72
HLA-DMAP28067 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DMAP28067 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.28□□□□□ -1.72
HLA-DMAP28067 IMMP1LP3-201ENST00000604197 224 ntBASIC4.28□□□□□ -1.72
HLA-DMAP28067 COX6CP4-201ENST00000605798 228 ntBASIC4.28□□□□□ -1.72
HLA-DMAP28067 HTR1DP1-201ENST00000616500 888 ntBASIC4.28□□□□□ -1.72
HLA-DMAP28067 MIR6806-201ENST00000622141 64 ntBASIC4.28□□□□□ -1.72
HLA-DMAP28067 CU639417.4-201ENST00000623928 207 ntBASIC4.28□□□□□ -1.72
HLA-DMAP28067 AC007683.2-201ENST00000624681 714 ntBASIC4.28□□□□□ -1.72
HLA-DMAP28067 BMS1P21-201ENST00000634565 365 ntBASIC4.28□□□□□ -1.72
HLA-DMAP28067 CASC19-222ENST00000641321 1173 ntBASIC4.28□□□□□ -1.72
HLA-DMAP28067 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
HLA-DMAP28067 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.28□□□□□ -1.72
HLA-DMAP28067 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DMAP28067 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DMAP28067 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HLA-DMAP28067 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.28□□□□□ -1.72
HLA-DMAP28067 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
HLA-DMAP28067 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DMAP28067 BX005019.1-201ENST00000561881 1810 ntBASIC4.28□□□□□ -1.72
HLA-DMAP28067 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DMAP28067 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HLA-DMAP28067 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DMAP28067 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
HLA-DMAP28067 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DMAP28067 RNA5SP52-201ENST00000362448 134 ntBASIC4.27□□□□□ -1.73
HLA-DMAP28067 RNU6-1331P-201ENST00000363658 106 ntBASIC4.27□□□□□ -1.73
HLA-DMAP28067 RNU6-673P-201ENST00000365084 104 ntBASIC4.27□□□□□ -1.73
HLA-DMAP28067 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DMAP28067 MIR93-201ENST00000385024 80 ntBASIC4.27□□□□□ -1.73
HLA-DMAP28067 AC093719.1-202ENST00000392735 373 ntBASIC4.27□□□□□ -1.73
HLA-DMAP28067 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
HLA-DMAP28067 AL645733.1-201ENST00000402250 217 ntBASIC4.27□□□□□ -1.73
HLA-DMAP28067 RNA5SP104-201ENST00000410989 118 ntBASIC4.27□□□□□ -1.73
HLA-DMAP28067 GSTM3P2-201ENST00000412746 530 ntBASIC4.27□□□□□ -1.73
HLA-DMAP28067 GABARAPL3-201ENST00000412799 354 ntBASIC4.27□□□□□ -1.73
HLA-DMAP28067 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DMAP28067 AC099336.2-201ENST00000422457 254 ntBASIC4.27□□□□□ -1.73
HLA-DMAP28067 RPS12P5-201ENST00000423449 371 ntBASIC4.27□□□□□ -1.73
HLA-DMAP28067 TNPO1P1-201ENST00000423641 1138 ntBASIC4.27□□□□□ -1.73
HLA-DMAP28067 DYNLL1P7-201ENST00000429273 258 ntBASIC4.27□□□□□ -1.73
HLA-DMAP28067 AL357520.1-201ENST00000441557 453 ntBASIC4.27□□□□□ -1.73
HLA-DMAP28067 AL445665.1-202ENST00000452436 324 ntBASIC4.27□□□□□ -1.73
HLA-DMAP28067 AC118758.1-202ENST00000454719 225 ntBASIC4.27□□□□□ -1.73
HLA-DMAP28067 AC099560.2-201ENST00000457554 255 ntBASIC4.27□□□□□ -1.73
HLA-DMAP28067 APOOP2-201ENST00000461561 539 ntBASIC4.27□□□□□ -1.73
HLA-DMAP28067 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HLA-DMAP28067 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DMAP28067 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DMAP28067 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DMAP28067 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DMAP28067 AC138207.8-204ENST00000579588 527 ntBASIC4.27□□□□□ -1.73
HLA-DMAP28067 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DMAP28067 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DMAP28067 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DMAP28067 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DMAP28067 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DMAP28067 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DMAP28067 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DMAP28067 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DMAP28067 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DMAP28067 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
HLA-DMAP28067 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
HLA-DMAP28067 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DMAP28067 AC027290.2-201ENST00000623210 18662 ntBASIC4.27□□□□□ -1.73
HLA-DMAP28067 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DMAP28067 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DMAP28067 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.26□□□□□ -1.73
HLA-DMAP28067 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DMAP28067 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.26□□□□□ -1.73
HLA-DMAP28067 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.26□□□□□ -1.73
HLA-DMAP28067 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
HLA-DMAP28067 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DMAP28067 PHKBP1-201ENST00000450951 1951 ntBASIC4.26□□□□□ -1.73
HLA-DMAP28067 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DMAP28067 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.26□□□□□ -1.73
HLA-DMAP28067 RNA5SP46-201ENST00000362370 120 ntBASIC4.26□□□□□ -1.73
HLA-DMAP28067 U3.35-201ENST00000408405 208 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms