Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.68□□□□□ -1.66
COL5A1P20908 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
COL5A1P20908 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC4.68□□□□□ -1.66
COL5A1P20908 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC4.68□□□□□ -1.66
COL5A1P20908 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
COL5A1P20908 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.67□□□□□ -1.66
COL5A1P20908 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL5A1P20908 SNORA11.2-201ENST00000408318 127 ntBASIC4.67□□□□□ -1.66
COL5A1P20908 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COL5A1P20908 AL136231.1-201ENST00000429407 730 ntBASIC4.67□□□□□ -1.66
COL5A1P20908 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.67□□□□□ -1.66
COL5A1P20908 AL049874.2-201ENST00000492636 288 ntBASIC4.67□□□□□ -1.66
COL5A1P20908 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.67□□□□□ -1.66
COL5A1P20908 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.67□□□□□ -1.66
COL5A1P20908 RNA5SP143-201ENST00000516936 115 ntBASIC4.67□□□□□ -1.66
COL5A1P20908 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.67□□□□□ -1.66
COL5A1P20908 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.67□□□□□ -1.66
COL5A1P20908 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.67□□□□□ -1.66
COL5A1P20908 AL022401.1-201ENST00000619498 108 ntBASIC4.67□□□□□ -1.66
COL5A1P20908 PCAT14-202ENST00000627127 3935 ntBASIC4.67□□□□□ -1.66
COL5A1P20908 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COL5A1P20908 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.67□□□□□ -1.66
COL5A1P20908 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COL5A1P20908 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL5A1P20908 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
COL5A1P20908 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COL5A1P20908 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL5A1P20908 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
COL5A1P20908 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL5A1P20908 AC002525.1-201ENST00000624392 1622 ntBASIC4.67□□□□□ -1.66
COL5A1P20908 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COL5A1P20908 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL5A1P20908 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL5A1P20908 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COL5A1P20908 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL5A1P20908 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC4.67□□□□□ -1.66
COL5A1P20908 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL5A1P20908 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.67□□□□□ -1.66
COL5A1P20908 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL5A1P20908 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL5A1P20908 RNA5SP447-201ENST00000363749 119 ntBASIC4.67□□□□□ -1.66
COL5A1P20908 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COL5A1P20908 AC025750.1-201ENST00000399891 379 ntBASIC4.67□□□□□ -1.66
COL5A1P20908 RN7SKP267-201ENST00000410381 285 ntBASIC4.67□□□□□ -1.66
COL5A1P20908 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.67□□□□□ -1.66
COL5A1P20908 AC073052.1-201ENST00000440417 714 ntBASIC4.67□□□□□ -1.66
COL5A1P20908 AP001781.1-201ENST00000530977 207 ntBASIC4.67□□□□□ -1.66
COL5A1P20908 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.67□□□□□ -1.66
COL5A1P20908 AP000619.2-201ENST00000546014 969 ntBASIC4.67□□□□□ -1.66
COL5A1P20908 AC106785.1-201ENST00000565935 262 ntBASIC4.67□□□□□ -1.66
COL5A1P20908 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
COL5A1P20908 AC024941.1-201ENST00000612250 334 ntBASIC4.67□□□□□ -1.66
COL5A1P20908 AC114781.5-201ENST00000615297 108 ntBASIC4.67□□□□□ -1.66
COL5A1P20908 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.67□□□□□ -1.66
COL5A1P20908 AC133552.1-201ENST00000569988 4007 ntBASIC4.67□□□□□ -1.66
COL5A1P20908 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.66□□□□□ -1.66
COL5A1P20908 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
COL5A1P20908 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL5A1P20908 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL5A1P20908 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.66□□□□□ -1.66
COL5A1P20908 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
COL5A1P20908 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL5A1P20908 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
COL5A1P20908 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COL5A1P20908 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
COL5A1P20908 RNA5SP187-201ENST00000384400 119 ntBASIC4.66□□□□□ -1.66
COL5A1P20908 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
COL5A1P20908 RPL21P108-201ENST00000413857 481 ntBASIC4.66□□□□□ -1.66
COL5A1P20908 TCEA1P3-201ENST00000443005 880 ntBASIC4.66□□□□□ -1.66
COL5A1P20908 AC004980.3-201ENST00000447046 365 ntBASIC4.66□□□□□ -1.66
COL5A1P20908 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.66□□□□□ -1.66
COL5A1P20908 AC091167.1-201ENST00000492017 396 ntBASIC4.66□□□□□ -1.66
COL5A1P20908 AC015795.1-201ENST00000513669 327 ntBASIC4.66□□□□□ -1.66
COL5A1P20908 MED28P5-201ENST00000528254 438 ntBASIC4.66□□□□□ -1.66
COL5A1P20908 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.66□□□□□ -1.66
COL5A1P20908 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.66□□□□□ -1.66
COL5A1P20908 AC022726.1-201ENST00000587475 207 ntBASIC4.66□□□□□ -1.66
COL5A1P20908 AC015914.2-201ENST00000618167 288 ntBASIC4.66□□□□□ -1.66
COL5A1P20908 AC002044.3-201ENST00000623314 541 ntBASIC4.66□□□□□ -1.66
COL5A1P20908 AC243960.7-201ENST00000623532 707 ntBASIC4.66□□□□□ -1.66
COL5A1P20908 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.66□□□□□ -1.66
COL5A1P20908 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.66□□□□□ -1.66
COL5A1P20908 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL5A1P20908 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COL5A1P20908 AC009643.2-201ENST00000603543 1448 ntBASIC4.66□□□□□ -1.66
COL5A1P20908 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL5A1P20908 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL5A1P20908 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL5A1P20908 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL5A1P20908 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL5A1P20908 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.66□□□□□ -1.66
COL5A1P20908 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.65□□□□□ -1.66
COL5A1P20908 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
COL5A1P20908 OR4K17-201ENST00000315543 1032 ntBASIC4.65□□□□□ -1.66
COL5A1P20908 RNA5SP44-201ENST00000410446 133 ntBASIC4.65□□□□□ -1.66
COL5A1P20908 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.65□□□□□ -1.66
COL5A1P20908 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.65□□□□□ -1.66
COL5A1P20908 AC097523.2-201ENST00000435551 652 ntBASIC4.65□□□□□ -1.66
COL5A1P20908 AC079168.2-201ENST00000453977 416 ntBASIC4.65□□□□□ -1.66
COL5A1P20908 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms