Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AC004232.3-201ENST00000622977 525 ntBASIC4.93□□□□□ -1.62
HMGA1P17096 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC4.93□□□□□ -1.62
HMGA1P17096 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HMGA1P17096 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HMGA1P17096 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HMGA1P17096 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HMGA1P17096 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HMGA1P17096 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
HMGA1P17096 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
HMGA1P17096 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.93□□□□□ -1.62
HMGA1P17096 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.93□□□□□ -1.62
HMGA1P17096 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HMGA1P17096 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
HMGA1P17096 AL592148.3-201ENST00000608771 2646 ntBASIC4.93□□□□□ -1.62
HMGA1P17096 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HMGA1P17096 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.92□□□□□ -1.62
HMGA1P17096 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HMGA1P17096 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HMGA1P17096 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
HMGA1P17096 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
HMGA1P17096 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HMGA1P17096 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
HMGA1P17096 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.92□□□□□ -1.62
HMGA1P17096 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HMGA1P17096 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC4.92□□□□□ -1.62
HMGA1P17096 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HMGA1P17096 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.92□□□□□ -1.62
HMGA1P17096 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HMGA1P17096 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HMGA1P17096 U3.22-201ENST00000391120 215 ntBASIC4.92□□□□□ -1.62
HMGA1P17096 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.92□□□□□ -1.62
HMGA1P17096 RGS17P1-201ENST00000423358 553 ntBASIC4.92□□□□□ -1.62
HMGA1P17096 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.92□□□□□ -1.62
HMGA1P17096 ELOCP3-201ENST00000439303 348 ntBASIC4.92□□□□□ -1.62
HMGA1P17096 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HMGA1P17096 ARL2BPP10-201ENST00000446487 531 ntBASIC4.92□□□□□ -1.62
HMGA1P17096 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.92□□□□□ -1.62
HMGA1P17096 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
HMGA1P17096 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.92□□□□□ -1.62
HMGA1P17096 NDUFA5P9-201ENST00000472609 340 ntBASIC4.92□□□□□ -1.62
HMGA1P17096 MTND4LP2-201ENST00000502312 285 ntBASIC4.92□□□□□ -1.62
HMGA1P17096 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.92□□□□□ -1.62
HMGA1P17096 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.92□□□□□ -1.62
HMGA1P17096 HNRNPRP2-201ENST00000528421 743 ntBASIC4.92□□□□□ -1.62
HMGA1P17096 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.92□□□□□ -1.62
HMGA1P17096 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.92□□□□□ -1.62
HMGA1P17096 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.92□□□□□ -1.62
HMGA1P17096 AC127024.5-201ENST00000580085 462 ntBASIC4.92□□□□□ -1.62
HMGA1P17096 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.92□□□□□ -1.62
HMGA1P17096 RPL12P25-202ENST00000598100 674 ntBASIC4.92□□□□□ -1.62
HMGA1P17096 Z95327.3-201ENST00000610385 572 ntBASIC4.92□□□□□ -1.62
HMGA1P17096 AC083809.1-201ENST00000615051 472 ntBASIC4.92□□□□□ -1.62
HMGA1P17096 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC4.92□□□□□ -1.62
HMGA1P17096 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HMGA1P17096 AL137100.1-201ENST00000556703 1620 ntBASIC4.92□□□□□ -1.62
HMGA1P17096 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.92□□□□□ -1.62
HMGA1P17096 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
HMGA1P17096 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.92□□□□□ -1.62
HMGA1P17096 AC139713.2-214ENST00000642059 1811 ntBASIC4.92□□□□□ -1.62
HMGA1P17096 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
HMGA1P17096 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.92□□□□□ -1.62
HMGA1P17096 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.92□□□□□ -1.62
HMGA1P17096 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HMGA1P17096 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.91□□□□□ -1.62
HMGA1P17096 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC4.91□□□□□ -1.62
HMGA1P17096 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HMGA1P17096 RNU4-39P-201ENST00000362455 127 ntBASIC4.91□□□□□ -1.62
HMGA1P17096 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HMGA1P17096 ELOCP19-201ENST00000411919 318 ntBASIC4.91□□□□□ -1.62
HMGA1P17096 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.91□□□□□ -1.62
HMGA1P17096 AL732292.1-201ENST00000426692 226 ntBASIC4.91□□□□□ -1.62
HMGA1P17096 C4BPAP2-201ENST00000428434 478 ntBASIC4.91□□□□□ -1.62
HMGA1P17096 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.91□□□□□ -1.62
HMGA1P17096 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.91□□□□□ -1.62
HMGA1P17096 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.91□□□□□ -1.62
HMGA1P17096 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.91□□□□□ -1.62
HMGA1P17096 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.91□□□□□ -1.62
HMGA1P17096 AC092905.1-201ENST00000467527 949 ntBASIC4.91□□□□□ -1.62
HMGA1P17096 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC4.91□□□□□ -1.62
HMGA1P17096 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.91□□□□□ -1.62
HMGA1P17096 AP001781.1-201ENST00000530977 207 ntBASIC4.91□□□□□ -1.62
HMGA1P17096 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.91□□□□□ -1.62
HMGA1P17096 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.91□□□□□ -1.62
HMGA1P17096 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.91□□□□□ -1.62
HMGA1P17096 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.91□□□□□ -1.62
HMGA1P17096 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.91□□□□□ -1.62
HMGA1P17096 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.91□□□□□ -1.62
HMGA1P17096 MIR4284-201ENST00000578924 81 ntBASIC4.91□□□□□ -1.62
HMGA1P17096 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HMGA1P17096 AC073137.1-201ENST00000605636 634 ntBASIC4.91□□□□□ -1.62
HMGA1P17096 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.91□□□□□ -1.62
HMGA1P17096 AC100847.1-201ENST00000611316 481 ntBASIC4.91□□□□□ -1.62
HMGA1P17096 MIR6758-201ENST00000620653 63 ntBASIC4.91□□□□□ -1.62
HMGA1P17096 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.91□□□□□ -1.62
HMGA1P17096 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC4.91□□□□□ -1.62
HMGA1P17096 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HMGA1P17096 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HMGA1P17096 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
HMGA1P17096 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HMGA1P17096 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms