Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 SNORA37-201ENST00000384504 129 ntBASIC8.17□□□□□ -1.1
TOP2AP11388 RNA5SP317-201ENST00000410176 116 ntBASIC8.17□□□□□ -1.1
TOP2AP11388 RNA5SP311-201ENST00000411290 116 ntBASIC8.17□□□□□ -1.1
TOP2AP11388 EEF1A1P1-201ENST00000447052 739 ntBASIC8.17□□□□□ -1.1
TOP2AP11388 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC8.17□□□□□ -1.1
TOP2AP11388 RN7SL810P-201ENST00000493031 276 ntBASIC8.17□□□□□ -1.1
TOP2AP11388 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TOP2AP11388 RNA5SP315-201ENST00000516340 116 ntBASIC8.17□□□□□ -1.1
TOP2AP11388 RNA5SP312-201ENST00000517068 116 ntBASIC8.17□□□□□ -1.1
TOP2AP11388 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC8.17□□□□□ -1.1
TOP2AP11388 Z95327.3-201ENST00000610385 572 ntBASIC8.17□□□□□ -1.1
TOP2AP11388 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TOP2AP11388 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
TOP2AP11388 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TOP2AP11388 AC020656.2-201ENST00000613291 5309 ntBASIC8.17□□□□□ -1.1
TOP2AP11388 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TOP2AP11388 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TOP2AP11388 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TOP2AP11388 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TOP2AP11388 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TOP2AP11388 SNORA70C-201ENST00000384538 135 ntBASIC8.16□□□□□ -1.1
TOP2AP11388 RGS17P1-201ENST00000423358 553 ntBASIC8.16□□□□□ -1.1
TOP2AP11388 AC073073.1-201ENST00000493920 463 ntBASIC8.16□□□□□ -1.1
TOP2AP11388 IGHVIII-2-1-201ENST00000518843 291 ntBASIC8.16□□□□□ -1.1
TOP2AP11388 AC005868.1-201ENST00000536421 331 ntBASIC8.16□□□□□ -1.1
TOP2AP11388 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC8.16□□□□□ -1.1
TOP2AP11388 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC8.16□□□□□ -1.1
TOP2AP11388 FKBP1BP1-201ENST00000553366 325 ntBASIC8.16□□□□□ -1.1
TOP2AP11388 AC007224.1-201ENST00000564410 144 ntBASIC8.16□□□□□ -1.1
TOP2AP11388 MIR4420-201ENST00000583944 77 ntBASIC8.16□□□□□ -1.1
TOP2AP11388 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC8.16□□□□□ -1.1
TOP2AP11388 BX005214.3-202ENST00000619809 325 ntBASIC8.16□□□□□ -1.1
TOP2AP11388 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
TOP2AP11388 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC8.16□□□□□ -1.1
TOP2AP11388 AC090017.1-201ENST00000548612 1779 ntBASIC8.16□□□□□ -1.1
TOP2AP11388 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
TOP2AP11388 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
TOP2AP11388 ATP5F1P2-201ENST00000398143 760 ntBASIC8.15□□□□□ -1.1
TOP2AP11388 SDHCP2-201ENST00000398565 501 ntBASIC8.15□□□□□ -1.1
TOP2AP11388 RPS29P17-201ENST00000430795 166 ntBASIC8.15□□□□□ -1.1
TOP2AP11388 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC8.15□□□□□ -1.1
TOP2AP11388 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC8.15□□□□□ -1.1
TOP2AP11388 APOA2-207ENST00000470459 416 ntTSL 5 BASIC8.15□□□□□ -1.1
TOP2AP11388 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC8.15□□□□□ -1.1
TOP2AP11388 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
TOP2AP11388 AC024941.1-201ENST00000612250 334 ntBASIC8.15□□□□□ -1.1
TOP2AP11388 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC8.15□□□□□ -1.1
TOP2AP11388 MIR492-201ENST00000638676 116 ntBASIC8.15□□□□□ -1.1
TOP2AP11388 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
TOP2AP11388 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC8.15□□□□□ -1.11
TOP2AP11388 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
TOP2AP11388 AL360270.2-201ENST00000562952 5985 ntBASIC8.15□□□□□ -1.11
TOP2AP11388 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC8.15□□□□□ -1.11
TOP2AP11388 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TOP2AP11388 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TOP2AP11388 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
TOP2AP11388 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
TOP2AP11388 AC008033.1-201ENST00000216407 1162 ntBASIC8.14□□□□□ -1.11
TOP2AP11388 AP001324.1-201ENST00000428553 399 ntBASIC8.14□□□□□ -1.11
TOP2AP11388 RPL23AP93-201ENST00000440847 484 ntBASIC8.14□□□□□ -1.11
TOP2AP11388 RN7SL303P-201ENST00000469773 251 ntBASIC8.14□□□□□ -1.11
TOP2AP11388 AC106806.2-201ENST00000509365 500 ntBASIC8.14□□□□□ -1.11
TOP2AP11388 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC8.14□□□□□ -1.11
TOP2AP11388 AP000827.1-201ENST00000527814 258 ntBASIC8.14□□□□□ -1.11
TOP2AP11388 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TOP2AP11388 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC8.14□□□□□ -1.11
TOP2AP11388 AC009120.7-201ENST00000623452 780 ntBASIC8.14□□□□□ -1.11
TOP2AP11388 AC011815.3-201ENST00000624194 473 ntBASIC8.14□□□□□ -1.11
TOP2AP11388 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TOP2AP11388 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TOP2AP11388 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC8.14□□□□□ -1.11
TOP2AP11388 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TOP2AP11388 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TOP2AP11388 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
TOP2AP11388 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
TOP2AP11388 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
TOP2AP11388 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TOP2AP11388 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TOP2AP11388 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
TOP2AP11388 AL034370.1-201ENST00000397254 1590 ntBASIC8.14□□□□□ -1.11
TOP2AP11388 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC8.13□□□□□ -1.11
TOP2AP11388 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC8.13□□□□□ -1.11
TOP2AP11388 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC8.13□□□□□ -1.11
TOP2AP11388 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
TOP2AP11388 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC8.13□□□□□ -1.11
TOP2AP11388 AC011477.5-201ENST00000586571 259 ntBASIC8.13□□□□□ -1.11
TOP2AP11388 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC8.13□□□□□ -1.11
TOP2AP11388 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
TOP2AP11388 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC8.13□□□□□ -1.11
TOP2AP11388 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC8.13□□□□□ -1.11
TOP2AP11388 AC245389.2-201ENST00000616023 576 ntBASIC8.13□□□□□ -1.11
TOP2AP11388 SNX18P1Y-201ENST00000616231 511 ntBASIC8.13□□□□□ -1.11
TOP2AP11388 ZYXP1-201ENST00000617638 118 ntBASIC8.13□□□□□ -1.11
TOP2AP11388 AC242843.1-201ENST00000618702 573 ntBASIC8.13□□□□□ -1.11
TOP2AP11388 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
TOP2AP11388 ASNSP1-204ENST00000641977 1664 ntBASIC8.13□□□□□ -1.11
TOP2AP11388 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
TOP2AP11388 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TOP2AP11388 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TOP2AP11388 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms