Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.58□□□□□ -1.52
RB1P06400 AC096741.1-201ENST00000472250 846 ntBASIC5.58□□□□□ -1.52
RB1P06400 COX6B1P5-201ENST00000509843 249 ntBASIC5.58□□□□□ -1.52
RB1P06400 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.58□□□□□ -1.52
RB1P06400 BTF3P13-201ENST00000513224 490 ntBASIC5.58□□□□□ -1.52
RB1P06400 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.58□□□□□ -1.52
RB1P06400 OR7E128P-201ENST00000532736 1024 ntBASIC5.58□□□□□ -1.52
RB1P06400 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RB1P06400 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.58□□□□□ -1.52
RB1P06400 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.58□□□□□ -1.52
RB1P06400 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.58□□□□□ -1.52
RB1P06400 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.58□□□□□ -1.52
RB1P06400 AP001357.1-201ENST00000586304 1053 ntBASIC5.58□□□□□ -1.52
RB1P06400 AP000769.2-201ENST00000602344 396 ntBASIC5.58□□□□□ -1.52
RB1P06400 MTCO2P22-201ENST00000603246 681 ntBASIC5.58□□□□□ -1.52
RB1P06400 AC008745.1-201ENST00000604064 271 ntBASIC5.58□□□□□ -1.52
RB1P06400 AL355802.4-201ENST00000607635 548 ntBASIC5.58□□□□□ -1.52
RB1P06400 CR589904.2-201ENST00000612533 440 ntBASIC5.58□□□□□ -1.52
RB1P06400 AL627230.1-201ENST00000613077 211 ntBASIC5.58□□□□□ -1.52
RB1P06400 AL591926.8-201ENST00000616876 211 ntBASIC5.58□□□□□ -1.52
RB1P06400 uc_338.7-201ENST00000621834 124 ntBASIC5.58□□□□□ -1.52
RB1P06400 AC012414.7-202ENST00000622705 1090 ntBASIC5.58□□□□□ -1.52
RB1P06400 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.58□□□□□ -1.52
RB1P06400 AC092159.4-201ENST00000624944 550 ntBASIC5.58□□□□□ -1.52
RB1P06400 OR5AC4P-202ENST00000642086 985 ntBASIC5.58□□□□□ -1.52
RB1P06400 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RB1P06400 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
RB1P06400 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
RB1P06400 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RB1P06400 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RB1P06400 MAPK10-263ENST00000641052 4307 ntBASIC5.58□□□□□ -1.52
RB1P06400 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.58□□□□□ -1.52
RB1P06400 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
RB1P06400 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RB1P06400 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RB1P06400 AC140134.1-201ENST00000511830 3544 ntBASIC5.57□□□□□ -1.52
RB1P06400 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RB1P06400 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RB1P06400 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RB1P06400 BCORP1-203ENST00000513194 5093 ntBASIC5.57□□□□□ -1.52
RB1P06400 AL034549.2-201ENST00000618285 3373 ntBASIC5.57□□□□□ -1.52
RB1P06400 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
RB1P06400 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
RB1P06400 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
RB1P06400 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RB1P06400 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
RB1P06400 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.57□□□□□ -1.52
RB1P06400 AL353796.1-201ENST00000561542 3241 ntBASIC5.57□□□□□ -1.52
RB1P06400 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RB1P06400 RNA5SP90-201ENST00000364801 99 ntBASIC5.57□□□□□ -1.52
RB1P06400 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.57□□□□□ -1.52
RB1P06400 RNU6-1320P-201ENST00000390838 107 ntBASIC5.57□□□□□ -1.52
RB1P06400 RNU6-1269P-201ENST00000391139 107 ntBASIC5.57□□□□□ -1.52
RB1P06400 AL034403.1-201ENST00000399414 885 ntBASIC5.57□□□□□ -1.52
RB1P06400 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.57□□□□□ -1.52
RB1P06400 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
RB1P06400 AL357078.2-201ENST00000416486 427 ntBASIC5.57□□□□□ -1.52
RB1P06400 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.57□□□□□ -1.52
RB1P06400 GNG5P5-201ENST00000420444 220 ntBASIC5.57□□□□□ -1.52
RB1P06400 C4BPAP2-201ENST00000428434 478 ntBASIC5.57□□□□□ -1.52
RB1P06400 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.57□□□□□ -1.52
RB1P06400 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.57□□□□□ -1.52
RB1P06400 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.57□□□□□ -1.52
RB1P06400 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.57□□□□□ -1.52
RB1P06400 RNU6-599P-201ENST00000459383 107 ntBASIC5.57□□□□□ -1.52
RB1P06400 RNU6-1193P-201ENST00000459461 107 ntBASIC5.57□□□□□ -1.52
RB1P06400 RN7SL385P-201ENST00000468873 276 ntBASIC5.57□□□□□ -1.52
RB1P06400 RN7SL459P-201ENST00000481078 302 ntBASIC5.57□□□□□ -1.52
RB1P06400 GLUD1P3-202ENST00000508551 200 ntBASIC5.57□□□□□ -1.52
RB1P06400 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.57□□□□□ -1.52
RB1P06400 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.57□□□□□ -1.52
RB1P06400 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
RB1P06400 UBE2FP2-201ENST00000566646 462 ntBASIC5.57□□□□□ -1.52
RB1P06400 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.57□□□□□ -1.52
RB1P06400 AC009027.1-201ENST00000604510 479 ntBASIC5.57□□□□□ -1.52
RB1P06400 AC004241.3-201ENST00000611728 517 ntBASIC5.57□□□□□ -1.52
RB1P06400 RNU6-368P-201ENST00000620928 107 ntBASIC5.57□□□□□ -1.52
RB1P06400 RNU6-538P-201ENST00000622329 107 ntBASIC5.57□□□□□ -1.52
RB1P06400 AP003400.3-201ENST00000624904 346 ntBASIC5.57□□□□□ -1.52
RB1P06400 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.57□□□□□ -1.52
RB1P06400 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
RB1P06400 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
RB1P06400 AC073869.10-201ENST00000642016 354 ntBASIC5.57□□□□□ -1.52
RB1P06400 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
RB1P06400 AC015799.1-201ENST00000622996 3122 ntBASIC5.57□□□□□ -1.52
RB1P06400 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
RB1P06400 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RB1P06400 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
RB1P06400 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
RB1P06400 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RB1P06400 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
RB1P06400 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.57□□□□□ -1.52
RB1P06400 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.56□□□□□ -1.52
RB1P06400 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.56□□□□□ -1.52
RB1P06400 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RB1P06400 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.56□□□□□ -1.52
RB1P06400 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.56□□□□□ -1.52
RB1P06400 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RB1P06400 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
RB1P06400 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms