Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC6.23□□□□□ -1.41
HLA-DOAP06340 AC079064.1-201ENST00000528365 362 ntBASIC6.23□□□□□ -1.41
HLA-DOAP06340 OR5D15P-201ENST00000531671 942 ntBASIC6.23□□□□□ -1.41
HLA-DOAP06340 AC135279.1-201ENST00000543493 504 ntBASIC6.23□□□□□ -1.41
HLA-DOAP06340 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-DOAP06340 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC6.23□□□□□ -1.41
HLA-DOAP06340 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC6.23□□□□□ -1.41
HLA-DOAP06340 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC6.23□□□□□ -1.41
HLA-DOAP06340 AP001357.1-201ENST00000586304 1053 ntBASIC6.23□□□□□ -1.41
HLA-DOAP06340 AC026741.1-201ENST00000605892 482 ntBASIC6.23□□□□□ -1.41
HLA-DOAP06340 AC116651.1-201ENST00000609724 556 ntBASIC6.23□□□□□ -1.41
HLA-DOAP06340 Mico1.1-201ENST00000611698 204 ntBASIC6.23□□□□□ -1.41
HLA-DOAP06340 AC025016.1-201ENST00000616746 682 ntBASIC6.23□□□□□ -1.41
HLA-DOAP06340 AC005618.4-201ENST00000625053 554 ntBASIC6.23□□□□□ -1.41
HLA-DOAP06340 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-DOAP06340 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-DOAP06340 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-DOAP06340 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
HLA-DOAP06340 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.23□□□□□ -1.41
HLA-DOAP06340 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.23□□□□□ -1.41
HLA-DOAP06340 OR52B5P-204ENST00000641744 3467 ntBASIC6.23□□□□□ -1.41
HLA-DOAP06340 AC004158.1-201ENST00000564508 4319 ntBASIC6.23□□□□□ -1.41
HLA-DOAP06340 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-DOAP06340 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-DOAP06340 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-DOAP06340 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-DOAP06340 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-DOAP06340 AC079298.1-201ENST00000625026 1619 ntBASIC6.22□□□□□ -1.41
HLA-DOAP06340 THAP12P4-201ENST00000528321 2266 ntBASIC6.22□□□□□ -1.41
HLA-DOAP06340 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
HLA-DOAP06340 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.22□□□□□ -1.41
HLA-DOAP06340 SNURFL-201ENST00000309296 343 ntBASIC6.22□□□□□ -1.41
HLA-DOAP06340 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-DOAP06340 AL109941.1-201ENST00000401925 229 ntBASIC6.22□□□□□ -1.41
HLA-DOAP06340 RNU4-64P-201ENST00000410795 131 ntBASIC6.22□□□□□ -1.41
HLA-DOAP06340 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC6.22□□□□□ -1.41
HLA-DOAP06340 TRIM60P5Y-201ENST00000413946 574 ntBASIC6.22□□□□□ -1.41
HLA-DOAP06340 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.22□□□□□ -1.41
HLA-DOAP06340 RPS4XP16-201ENST00000427198 791 ntBASIC6.22□□□□□ -1.41
HLA-DOAP06340 RPL12P28-201ENST00000430852 489 ntBASIC6.22□□□□□ -1.41
HLA-DOAP06340 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.22□□□□□ -1.41
HLA-DOAP06340 NDUFB4P8-201ENST00000435351 367 ntBASIC6.22□□□□□ -1.41
HLA-DOAP06340 RPS29P10-201ENST00000439197 166 ntBASIC6.22□□□□□ -1.41
HLA-DOAP06340 AL096829.2-201ENST00000446582 742 ntBASIC6.22□□□□□ -1.41
HLA-DOAP06340 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC6.22□□□□□ -1.41
HLA-DOAP06340 RPL32P14-201ENST00000463196 378 ntBASIC6.22□□□□□ -1.41
HLA-DOAP06340 AC097484.1-201ENST00000471148 389 ntBASIC6.22□□□□□ -1.41
HLA-DOAP06340 AC022133.1-201ENST00000490961 571 ntBASIC6.22□□□□□ -1.41
HLA-DOAP06340 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC6.22□□□□□ -1.41
HLA-DOAP06340 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-DOAP06340 AC111000.6-201ENST00000514471 709 ntBASIC6.22□□□□□ -1.41
HLA-DOAP06340 RNU5A-7P-201ENST00000515979 116 ntBASIC6.22□□□□□ -1.41
HLA-DOAP06340 AC103833.1-201ENST00000517442 172 ntBASIC6.22□□□□□ -1.41
HLA-DOAP06340 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC6.22□□□□□ -1.41
HLA-DOAP06340 MTATP6P15-201ENST00000527233 835 ntBASIC6.22□□□□□ -1.41
HLA-DOAP06340 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.22□□□□□ -1.41
HLA-DOAP06340 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.22□□□□□ -1.41
HLA-DOAP06340 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC6.22□□□□□ -1.41
HLA-DOAP06340 MRPS36P5-201ENST00000551909 298 ntBASIC6.22□□□□□ -1.41
HLA-DOAP06340 MTCYBP28-201ENST00000566728 1132 ntBASIC6.22□□□□□ -1.41
HLA-DOAP06340 AC023824.3-201ENST00000569003 562 ntBASIC6.22□□□□□ -1.41
HLA-DOAP06340 OR1F2P-201ENST00000570470 933 ntBASIC6.22□□□□□ -1.41
HLA-DOAP06340 MIR4436B2-201ENST00000581415 91 ntBASIC6.22□□□□□ -1.41
HLA-DOAP06340 MIR4436B1-201ENST00000583272 91 ntBASIC6.22□□□□□ -1.41
HLA-DOAP06340 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-DOAP06340 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC6.22□□□□□ -1.41
HLA-DOAP06340 AL022161.1-201ENST00000604390 213 ntBASIC6.22□□□□□ -1.41
HLA-DOAP06340 AL049539.1-201ENST00000611964 459 ntBASIC6.22□□□□□ -1.41
HLA-DOAP06340 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-DOAP06340 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC6.22□□□□□ -1.41
HLA-DOAP06340 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.22□□□□□ -1.41
HLA-DOAP06340 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC6.22□□□□□ -1.41
HLA-DOAP06340 AC099654.6-201ENST00000636487 512 ntBASIC6.22□□□□□ -1.41
HLA-DOAP06340 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-DOAP06340 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-DOAP06340 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.22□□□□□ -1.41
HLA-DOAP06340 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
HLA-DOAP06340 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.22□□□□□ -1.41
HLA-DOAP06340 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-DOAP06340 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-DOAP06340 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-DOAP06340 AC083843.2-201ENST00000568248 6253 ntBASIC6.22□□□□□ -1.41
HLA-DOAP06340 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-DOAP06340 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-DOAP06340 AC003973.3-201ENST00000624863 2822 ntBASIC6.21□□□□□ -1.41
HLA-DOAP06340 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
HLA-DOAP06340 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.21□□□□□ -1.41
HLA-DOAP06340 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
HLA-DOAP06340 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.41
HLA-DOAP06340 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.21□□□□□ -1.42
HLA-DOAP06340 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DOAP06340 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.21□□□□□ -1.42
HLA-DOAP06340 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
HLA-DOAP06340 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
HLA-DOAP06340 RNA5SP514-201ENST00000363717 111 ntBASIC6.21□□□□□ -1.42
HLA-DOAP06340 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DOAP06340 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC6.21□□□□□ -1.42
HLA-DOAP06340 TRIM60P17-201ENST00000415181 719 ntBASIC6.21□□□□□ -1.42
HLA-DOAP06340 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC6.21□□□□□ -1.42
HLA-DOAP06340 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms