Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.39□□□□□ -1.55
VTNP04004 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.39□□□□□ -1.55
VTNP04004 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VTNP04004 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VTNP04004 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.38□□□□□ -1.55
VTNP04004 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VTNP04004 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
VTNP04004 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VTNP04004 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VTNP04004 AC012078.1-201ENST00000405035 1646 ntBASIC5.38□□□□□ -1.55
VTNP04004 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VTNP04004 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.38□□□□□ -1.55
VTNP04004 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.38□□□□□ -1.55
VTNP04004 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VTNP04004 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VTNP04004 AC079741.1-201ENST00000321498 212 ntBASIC5.38□□□□□ -1.55
VTNP04004 SNORA73.1-201ENST00000363107 205 ntBASIC5.38□□□□□ -1.55
VTNP04004 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
VTNP04004 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VTNP04004 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VTNP04004 U3.30-201ENST00000391308 210 ntBASIC5.38□□□□□ -1.55
VTNP04004 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.38□□□□□ -1.55
VTNP04004 RN7SKP16-201ENST00000410180 299 ntBASIC5.38□□□□□ -1.55
VTNP04004 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.38□□□□□ -1.55
VTNP04004 NPM1P40-201ENST00000412758 733 ntBASIC5.38□□□□□ -1.55
VTNP04004 RSU1P3-201ENST00000412878 835 ntBASIC5.38□□□□□ -1.55
VTNP04004 FAR2P2-201ENST00000413041 594 ntBASIC5.38□□□□□ -1.55
VTNP04004 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VTNP04004 AC245028.1-201ENST00000423259 256 ntBASIC5.38□□□□□ -1.55
VTNP04004 FAR2P4-202ENST00000425399 584 ntBASIC5.38□□□□□ -1.55
VTNP04004 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.38□□□□□ -1.55
VTNP04004 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.38□□□□□ -1.55
VTNP04004 NRBF2P3-201ENST00000432731 865 ntBASIC5.38□□□□□ -1.55
VTNP04004 AC073052.1-201ENST00000440417 714 ntBASIC5.38□□□□□ -1.55
VTNP04004 TPT1P13-201ENST00000449760 499 ntBASIC5.38□□□□□ -1.55
VTNP04004 AC009220.1-201ENST00000451614 275 ntBASIC5.38□□□□□ -1.55
VTNP04004 PRPF38AP1-201ENST00000451976 933 ntBASIC5.38□□□□□ -1.55
VTNP04004 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.38□□□□□ -1.55
VTNP04004 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.38□□□□□ -1.55
VTNP04004 AC011005.3-201ENST00000491624 395 ntBASIC5.38□□□□□ -1.55
VTNP04004 AC093720.1-201ENST00000505681 714 ntBASIC5.38□□□□□ -1.55
VTNP04004 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.38□□□□□ -1.55
VTNP04004 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.38□□□□□ -1.55
VTNP04004 NPM1P21-201ENST00000513394 762 ntBASIC5.38□□□□□ -1.55
VTNP04004 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.38□□□□□ -1.55
VTNP04004 AC100784.1-201ENST00000522790 310 ntBASIC5.38□□□□□ -1.55
VTNP04004 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.38□□□□□ -1.55
VTNP04004 SOX5P1-201ENST00000524155 1127 ntBASIC5.38□□□□□ -1.55
VTNP04004 GSTP1P1-201ENST00000548078 319 ntBASIC5.38□□□□□ -1.55
VTNP04004 AL049839.1-201ENST00000556151 657 ntBASIC5.38□□□□□ -1.55
VTNP04004 AC018695.5-201ENST00000605872 315 ntBASIC5.38□□□□□ -1.55
VTNP04004 AL118508.4-201ENST00000624142 1176 ntBASIC5.38□□□□□ -1.55
VTNP04004 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.38□□□□□ -1.55
VTNP04004 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.38□□□□□ -1.55
VTNP04004 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
VTNP04004 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.38□□□□□ -1.55
VTNP04004 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.38□□□□□ -1.55
VTNP04004 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
VTNP04004 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VTNP04004 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
VTNP04004 NCLP2-201ENST00000416078 1462 ntBASIC5.38□□□□□ -1.55
VTNP04004 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VTNP04004 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VTNP04004 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
VTNP04004 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
VTNP04004 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
VTNP04004 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.37□□□□□ -1.55
VTNP04004 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.37□□□□□ -1.55
VTNP04004 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VTNP04004 AL022311.1-201ENST00000623726 19416 ntBASIC5.37□□□□□ -1.55
VTNP04004 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VTNP04004 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
VTNP04004 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
VTNP04004 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VTNP04004 ADAM24P-201ENST00000398655 2101 ntBASIC5.37□□□□□ -1.55
VTNP04004 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC5.37□□□□□ -1.55
VTNP04004 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VTNP04004 AC069213.2-201ENST00000420238 366 ntBASIC5.37□□□□□ -1.55
VTNP04004 AC009506.2-201ENST00000420635 840 ntBASIC5.37□□□□□ -1.55
VTNP04004 NIPA2P1-201ENST00000426223 976 ntBASIC5.37□□□□□ -1.55
VTNP04004 AC005154.2-201ENST00000438110 379 ntBASIC5.37□□□□□ -1.55
VTNP04004 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VTNP04004 OR52Y1P-201ENST00000452418 828 ntBASIC5.37□□□□□ -1.55
VTNP04004 AL513533.1-201ENST00000453728 415 ntBASIC5.37□□□□□ -1.55
VTNP04004 AC104849.1-201ENST00000462623 405 ntBASIC5.37□□□□□ -1.55
VTNP04004 RN7SL354P-201ENST00000469282 294 ntBASIC5.37□□□□□ -1.55
VTNP04004 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.37□□□□□ -1.55
VTNP04004 RN7SL860P-201ENST00000473738 223 ntBASIC5.37□□□□□ -1.55
VTNP04004 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
VTNP04004 AC093890.1-201ENST00000502554 540 ntBASIC5.37□□□□□ -1.55
VTNP04004 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.37□□□□□ -1.55
VTNP04004 GOLGA5P1-201ENST00000507317 980 ntBASIC5.37□□□□□ -1.55
VTNP04004 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.37□□□□□ -1.55
VTNP04004 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.37□□□□□ -1.55
VTNP04004 AC087272.1-201ENST00000523624 533 ntBASIC5.37□□□□□ -1.55
VTNP04004 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VTNP04004 MTND2P17-201ENST00000550281 688 ntBASIC5.37□□□□□ -1.55
VTNP04004 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.37□□□□□ -1.55
VTNP04004 AL049874.4-201ENST00000557593 255 ntBASIC5.37□□□□□ -1.55
VTNP04004 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 153.7 ms