Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC8.02□□□□□ -1.13
RNF40O75150 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RNF40O75150 AC025574.1-201ENST00000554784 1653 ntBASIC8.02□□□□□ -1.13
RNF40O75150 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RNF40O75150 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC8.02□□□□□ -1.13
RNF40O75150 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC8.01□□□□□ -1.13
RNF40O75150 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RNF40O75150 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RNF40O75150 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RNF40O75150 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC8.01□□□□□ -1.13
RNF40O75150 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC8.01□□□□□ -1.13
RNF40O75150 AL117339.4-201ENST00000608335 7063 ntBASIC8.01□□□□□ -1.13
RNF40O75150 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RNF40O75150 PLPPR1-202ENST00000395056 2318 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RNF40O75150 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RNF40O75150 RGS7-202ENST00000366563 2206 ntTSL 5 BASIC8.01□□□□□ -1.13
RNF40O75150 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC8.01□□□□□ -1.13
RNF40O75150 PAH-201ENST00000307000 2466 ntTSL 5 BASIC8.01□□□□□ -1.13
RNF40O75150 GAPDHP24-201ENST00000328713 983 ntBASIC8.01□□□□□ -1.13
RNF40O75150 RNU1-16P-201ENST00000365477 164 ntBASIC8.01□□□□□ -1.13
RNF40O75150 SSX6-201ENST00000376932 562 ntBASIC8.01□□□□□ -1.13
RNF40O75150 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RNF40O75150 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC8.01□□□□□ -1.13
RNF40O75150 MAST4-207ENST00000407621 559 ntTSL 2 BASIC8.01□□□□□ -1.13
RNF40O75150 OR51A3P-201ENST00000413596 924 ntBASIC8.01□□□□□ -1.13
RNF40O75150 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC8.01□□□□□ -1.13
RNF40O75150 AC005517.2-201ENST00000424673 553 ntBASIC8.01□□□□□ -1.13
RNF40O75150 AL138479.1-201ENST00000426913 484 ntBASIC8.01□□□□□ -1.13
RNF40O75150 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC8.01□□□□□ -1.13
RNF40O75150 NANOGP6-201ENST00000429190 847 ntBASIC8.01□□□□□ -1.13
RNF40O75150 Z98752.2-201ENST00000432727 312 ntBASIC8.01□□□□□ -1.13
RNF40O75150 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC8.01□□□□□ -1.13
RNF40O75150 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC8.01□□□□□ -1.13
RNF40O75150 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC8.01□□□□□ -1.13
RNF40O75150 AC012512.1-201ENST00000446594 718 ntBASIC8.01□□□□□ -1.13
RNF40O75150 GCNT1P5-201ENST00000449274 682 ntBASIC8.01□□□□□ -1.13
RNF40O75150 RPL36AP55-201ENST00000454114 305 ntBASIC8.01□□□□□ -1.13
RNF40O75150 BTF3P15-201ENST00000455606 336 ntBASIC8.01□□□□□ -1.13
RNF40O75150 RN7SL335P-201ENST00000482790 304 ntBASIC8.01□□□□□ -1.13
RNF40O75150 AC097263.1-201ENST00000496795 606 ntBASIC8.01□□□□□ -1.13
RNF40O75150 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RNF40O75150 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RNF40O75150 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC8.01□□□□□ -1.13
RNF40O75150 AC106760.2-201ENST00000504159 619 ntBASIC8.01□□□□□ -1.13
RNF40O75150 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RNF40O75150 POU5F1P7-201ENST00000508759 541 ntBASIC8.01□□□□□ -1.13
RNF40O75150 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RNF40O75150 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC8.01□□□□□ -1.13
RNF40O75150 RNU6-1261P-201ENST00000517194 104 ntBASIC8.01□□□□□ -1.13
RNF40O75150 AP002812.4-201ENST00000532139 286 ntBASIC8.01□□□□□ -1.13
RNF40O75150 FRG2IP-201ENST00000563581 781 ntBASIC8.01□□□□□ -1.13
RNF40O75150 EIF4EBP2P2-201ENST00000563883 333 ntBASIC8.01□□□□□ -1.13
RNF40O75150 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RNF40O75150 MIR4680-201ENST00000580906 66 ntBASIC8.01□□□□□ -1.13
RNF40O75150 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RNF40O75150 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC8.01□□□□□ -1.13
RNF40O75150 AC008782.1-201ENST00000603386 430 ntBASIC8.01□□□□□ -1.13
RNF40O75150 U1.22-201ENST00000605806 164 ntBASIC8.01□□□□□ -1.13
RNF40O75150 AC008966.2-201ENST00000606157 453 ntBASIC8.01□□□□□ -1.13
RNF40O75150 AC093913.1-201ENST00000614178 329 ntBASIC8.01□□□□□ -1.13
RNF40O75150 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC8.01□□□□□ -1.13
RNF40O75150 AC126773.4-201ENST00000612545 3043 ntBASIC8.01□□□□□ -1.13
RNF40O75150 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC8.01□□□□□ -1.13
RNF40O75150 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RNF40O75150 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RNF40O75150 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RNF40O75150 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RNF40O75150 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC8.01□□□□□ -1.13
RNF40O75150 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC8.01□□□□□ -1.13
RNF40O75150 MTND5P27-201ENST00000428871 1720 ntBASIC8□□□□□ -1.13
RNF40O75150 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC8□□□□□ -1.13
RNF40O75150 AURKA-205ENST00000395911 2145 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
RNF40O75150 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
RNF40O75150 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC8□□□□□ -1.13
RNF40O75150 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC8□□□□□ -1.13
RNF40O75150 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC8□□□□□ -1.13
RNF40O75150 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC8□□□□□ -1.13
RNF40O75150 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC8□□□□□ -1.13
RNF40O75150 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC8□□□□□ -1.13
RNF40O75150 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
RNF40O75150 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC8□□□□□ -1.13
RNF40O75150 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC8□□□□□ -1.13
RNF40O75150 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
RNF40O75150 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
RNF40O75150 FCGR3A-201ENST00000367967 2086 ntAPPRIS P1 TSL 3 BASIC8□□□□□ -1.13
RNF40O75150 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
RNF40O75150 MGP-201ENST00000228938 694 ntTSL 3 BASIC8□□□□□ -1.13
RNF40O75150 OR9K1P-201ENST00000326513 941 ntBASIC8□□□□□ -1.13
RNF40O75150 Y_RNA.47-201ENST00000362697 108 ntBASIC8□□□□□ -1.13
RNF40O75150 RNU6-1066P-201ENST00000363573 105 ntBASIC8□□□□□ -1.13
RNF40O75150 RNU6-379P-201ENST00000363813 104 ntBASIC8□□□□□ -1.13
RNF40O75150 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
RNF40O75150 RN7SKP117-201ENST00000410175 264 ntBASIC8□□□□□ -1.13
RNF40O75150 RNU6-985P-201ENST00000410182 104 ntBASIC8□□□□□ -1.13
RNF40O75150 AL358942.1-201ENST00000418595 1178 ntBASIC8□□□□□ -1.13
RNF40O75150 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC8□□□□□ -1.13
RNF40O75150 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC8□□□□□ -1.13
RNF40O75150 PPIL1P1-201ENST00000423936 499 ntBASIC8□□□□□ -1.13
RNF40O75150 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC8□□□□□ -1.13
RNF40O75150 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC8□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms