Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.65□□□□□ -1.5
PHGDHO43175 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.51
PHGDHO43175 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PHGDHO43175 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PHGDHO43175 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.65□□□□□ -1.51
PHGDHO43175 PDZK1P1-202ENST00000425209 1350 ntBASIC5.65□□□□□ -1.51
PHGDHO43175 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
PHGDHO43175 AL442128.2-201ENST00000620246 1824 ntBASIC5.64□□□□□ -1.51
PHGDHO43175 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
PHGDHO43175 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
PHGDHO43175 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PHGDHO43175 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.64□□□□□ -1.51
PHGDHO43175 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PHGDHO43175 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PHGDHO43175 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PHGDHO43175 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
PHGDHO43175 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PHGDHO43175 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
PHGDHO43175 RNU6-1339P-201ENST00000363574 91 ntBASIC5.64□□□□□ -1.51
PHGDHO43175 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.64□□□□□ -1.51
PHGDHO43175 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.64□□□□□ -1.51
PHGDHO43175 RNU6-1242P-201ENST00000391052 103 ntBASIC5.64□□□□□ -1.51
PHGDHO43175 AC099535.1-201ENST00000408928 371 ntBASIC5.64□□□□□ -1.51
PHGDHO43175 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.64□□□□□ -1.51
PHGDHO43175 RPS24P7-201ENST00000416921 246 ntBASIC5.64□□□□□ -1.51
PHGDHO43175 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.64□□□□□ -1.51
PHGDHO43175 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.64□□□□□ -1.51
PHGDHO43175 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.64□□□□□ -1.51
PHGDHO43175 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.64□□□□□ -1.51
PHGDHO43175 RPS27AP6-201ENST00000427962 448 ntBASIC5.64□□□□□ -1.51
PHGDHO43175 AC084290.1-201ENST00000434995 374 ntBASIC5.64□□□□□ -1.51
PHGDHO43175 MTCO2P20-201ENST00000437339 673 ntBASIC5.64□□□□□ -1.51
PHGDHO43175 VN1R110P-201ENST00000438988 971 ntBASIC5.64□□□□□ -1.51
PHGDHO43175 AMYP1-201ENST00000440059 1023 ntBASIC5.64□□□□□ -1.51
PHGDHO43175 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.64□□□□□ -1.51
PHGDHO43175 AC004022.1-201ENST00000447766 1066 ntBASIC5.64□□□□□ -1.51
PHGDHO43175 AC112492.1-201ENST00000449607 712 ntBASIC5.64□□□□□ -1.51
PHGDHO43175 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.64□□□□□ -1.51
PHGDHO43175 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PHGDHO43175 AC093166.2-201ENST00000455969 1017 ntBASIC5.64□□□□□ -1.51
PHGDHO43175 AL122020.1-201ENST00000472287 459 ntBASIC5.64□□□□□ -1.51
PHGDHO43175 TRBV8-2-201ENST00000475637 270 ntBASIC5.64□□□□□ -1.51
PHGDHO43175 AC091959.2-201ENST00000477363 321 ntBASIC5.64□□□□□ -1.51
PHGDHO43175 AL117692.1-201ENST00000494283 713 ntBASIC5.64□□□□□ -1.51
PHGDHO43175 RPS17P5-201ENST00000498293 408 ntBASIC5.64□□□□□ -1.51
PHGDHO43175 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.64□□□□□ -1.51
PHGDHO43175 HPRT1P2-201ENST00000505250 544 ntBASIC5.64□□□□□ -1.51
PHGDHO43175 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.64□□□□□ -1.51
PHGDHO43175 snoZ278.1-201ENST00000517059 112 ntBASIC5.64□□□□□ -1.51
PHGDHO43175 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.64□□□□□ -1.51
PHGDHO43175 MTCO3P15-201ENST00000526563 574 ntBASIC5.64□□□□□ -1.51
PHGDHO43175 UBTFL10-201ENST00000528532 562 ntBASIC5.64□□□□□ -1.51
PHGDHO43175 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PHGDHO43175 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.64□□□□□ -1.51
PHGDHO43175 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.64□□□□□ -1.51
PHGDHO43175 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.64□□□□□ -1.51
PHGDHO43175 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.64□□□□□ -1.51
PHGDHO43175 AC079905.1-201ENST00000549280 475 ntBASIC5.64□□□□□ -1.51
PHGDHO43175 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PHGDHO43175 AL845552.1-201ENST00000556820 323 ntBASIC5.64□□□□□ -1.51
PHGDHO43175 MIR4675-201ENST00000577898 77 ntBASIC5.64□□□□□ -1.51
PHGDHO43175 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.64□□□□□ -1.51
PHGDHO43175 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.64□□□□□ -1.51
PHGDHO43175 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.64□□□□□ -1.51
PHGDHO43175 AP001542.2-201ENST00000593141 364 ntBASIC5.64□□□□□ -1.51
PHGDHO43175 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.64□□□□□ -1.51
PHGDHO43175 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.64□□□□□ -1.51
PHGDHO43175 AL022394.1-201ENST00000606979 292 ntBASIC5.64□□□□□ -1.51
PHGDHO43175 AC009779.8-202ENST00000607990 932 ntBASIC5.64□□□□□ -1.51
PHGDHO43175 AL359091.2-201ENST00000609303 556 ntBASIC5.64□□□□□ -1.51
PHGDHO43175 AC055764.2-201ENST00000610089 670 ntBASIC5.64□□□□□ -1.51
PHGDHO43175 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.64□□□□□ -1.51
PHGDHO43175 AC068057.2-201ENST00000624047 895 ntBASIC5.64□□□□□ -1.51
PHGDHO43175 AL683826.1-201ENST00000624104 627 ntBASIC5.64□□□□□ -1.51
PHGDHO43175 OR1S1-201ENST00000624470 978 ntBASIC5.64□□□□□ -1.51
PHGDHO43175 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.64□□□□□ -1.51
PHGDHO43175 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.64□□□□□ -1.51
PHGDHO43175 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.64□□□□□ -1.51
PHGDHO43175 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
PHGDHO43175 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
PHGDHO43175 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
PHGDHO43175 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.64□□□□□ -1.51
PHGDHO43175 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PHGDHO43175 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
PHGDHO43175 MTND4P10-201ENST00000446199 1363 ntBASIC5.64□□□□□ -1.51
PHGDHO43175 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.64□□□□□ -1.51
PHGDHO43175 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.64□□□□□ -1.51
PHGDHO43175 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
PHGDHO43175 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.64□□□□□ -1.51
PHGDHO43175 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
PHGDHO43175 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.64□□□□□ -1.51
PHGDHO43175 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PHGDHO43175 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.63□□□□□ -1.51
PHGDHO43175 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PHGDHO43175 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PHGDHO43175 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PHGDHO43175 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.63□□□□□ -1.51
PHGDHO43175 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PHGDHO43175 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PHGDHO43175 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms