Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 OR8Q1P-201ENST00000526467 655 ntBASIC8.38□□□□□ -1.07
CUX2O14529 AC130364.2-201ENST00000528639 604 ntBASIC8.38□□□□□ -1.07
CUX2O14529 CCNG2P1-201ENST00000549521 1000 ntBASIC8.38□□□□□ -1.07
CUX2O14529 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CUX2O14529 AC073091.2-201ENST00000603205 907 ntBASIC8.38□□□□□ -1.07
CUX2O14529 AC005618.4-201ENST00000625053 554 ntBASIC8.38□□□□□ -1.07
CUX2O14529 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC8.38□□□□□ -1.07
CUX2O14529 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CUX2O14529 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CUX2O14529 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CUX2O14529 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC8.37□□□□□ -1.07
CUX2O14529 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CUX2O14529 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC8.37□□□□□ -1.07
CUX2O14529 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CUX2O14529 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
CUX2O14529 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC8.37□□□□□ -1.07
CUX2O14529 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CUX2O14529 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CUX2O14529 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
CUX2O14529 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CUX2O14529 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CUX2O14529 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC8.37□□□□□ -1.07
CUX2O14529 AL356387.2-201ENST00000422272 243 ntBASIC8.37□□□□□ -1.07
CUX2O14529 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CUX2O14529 AC007389.2-201ENST00000434630 306 ntBASIC8.37□□□□□ -1.07
CUX2O14529 PSAT1P4-201ENST00000466500 526 ntBASIC8.37□□□□□ -1.07
CUX2O14529 UQCRHP4-201ENST00000471686 272 ntBASIC8.37□□□□□ -1.07
CUX2O14529 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC8.37□□□□□ -1.07
CUX2O14529 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC8.37□□□□□ -1.07
CUX2O14529 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC8.37□□□□□ -1.07
CUX2O14529 AC019322.1-201ENST00000571869 389 ntBASIC8.37□□□□□ -1.07
CUX2O14529 AL356608.1-201ENST00000610034 820 ntBASIC8.37□□□□□ -1.07
CUX2O14529 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
CUX2O14529 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC8.36□□□□□ -1.07
CUX2O14529 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
CUX2O14529 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC8.36□□□□□ -1.07
CUX2O14529 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC8.36□□□□□ -1.07
CUX2O14529 AC007159.1-201ENST00000566529 4706 ntBASIC8.36□□□□□ -1.07
CUX2O14529 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC8.36□□□□□ -1.07
CUX2O14529 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CUX2O14529 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CUX2O14529 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
CUX2O14529 RN7SKP153-201ENST00000365026 316 ntBASIC8.36□□□□□ -1.07
CUX2O14529 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CUX2O14529 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
CUX2O14529 AC069157.1-201ENST00000421749 137 ntBASIC8.36□□□□□ -1.07
CUX2O14529 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC8.36□□□□□ -1.07
CUX2O14529 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC8.36□□□□□ -1.07
CUX2O14529 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC8.36□□□□□ -1.07
CUX2O14529 RPL23AP93-201ENST00000440847 484 ntBASIC8.36□□□□□ -1.07
CUX2O14529 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC8.36□□□□□ -1.07
CUX2O14529 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC8.36□□□□□ -1.07
CUX2O14529 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC8.36□□□□□ -1.07
CUX2O14529 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
CUX2O14529 AC004076.2-201ENST00000620532 3323 ntBASIC8.36□□□□□ -1.07
CUX2O14529 AL359955.1-201ENST00000455242 3275 ntBASIC8.36□□□□□ -1.07
CUX2O14529 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC8.36□□□□□ -1.07
CUX2O14529 STX3-208ENST00000641815 3236 ntBASIC8.36□□□□□ -1.07
CUX2O14529 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
CUX2O14529 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
CUX2O14529 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CUX2O14529 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC8.35□□□□□ -1.07
CUX2O14529 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CUX2O14529 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC8.35□□□□□ -1.07
CUX2O14529 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
CUX2O14529 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC8.35□□□□□ -1.07
CUX2O14529 SNORA2.3-201ENST00000383920 135 ntBASIC8.35□□□□□ -1.07
CUX2O14529 MIR491-201ENST00000384877 84 ntBASIC8.35□□□□□ -1.07
CUX2O14529 RN7SKP159-201ENST00000410657 292 ntBASIC8.35□□□□□ -1.07
CUX2O14529 RN7SKP17-201ENST00000411242 351 ntBASIC8.35□□□□□ -1.07
CUX2O14529 AL354766.1-201ENST00000423396 542 ntBASIC8.35□□□□□ -1.07
CUX2O14529 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC8.35□□□□□ -1.07
CUX2O14529 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC8.35□□□□□ -1.07
CUX2O14529 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC8.35□□□□□ -1.07
CUX2O14529 AC098976.1-201ENST00000513014 541 ntBASIC8.35□□□□□ -1.07
CUX2O14529 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC8.35□□□□□ -1.07
CUX2O14529 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CUX2O14529 RPL21P12-201ENST00000559810 515 ntBASIC8.35□□□□□ -1.07
CUX2O14529 AC011471.1-201ENST00000585766 187 ntBASIC8.35□□□□□ -1.07
CUX2O14529 AP000547.3-204ENST00000588548 2523 ntBASIC8.35□□□□□ -1.07
CUX2O14529 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CUX2O14529 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CUX2O14529 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CUX2O14529 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
CUX2O14529 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
CUX2O14529 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC8.35□□□□□ -1.07
CUX2O14529 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC8.35□□□□□ -1.07
CUX2O14529 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
CUX2O14529 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CUX2O14529 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CUX2O14529 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CUX2O14529 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
CUX2O14529 RNU6ATAC5P-201ENST00000388104 126 ntBASIC8.34□□□□□ -1.07
CUX2O14529 U3.35-201ENST00000408405 208 ntBASIC8.34□□□□□ -1.07
CUX2O14529 RNU6ATAC-201ENST00000408749 126 ntBASIC8.34□□□□□ -1.07
CUX2O14529 RNU6ATAC28P-201ENST00000459249 118 ntBASIC8.34□□□□□ -1.07
CUX2O14529 RPS7P7-201ENST00000463499 571 ntBASIC8.34□□□□□ -1.07
CUX2O14529 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC8.34□□□□□ -1.07
CUX2O14529 FAM27B-201ENST00000610601 213 ntBASIC8.34□□□□□ -1.07
CUX2O14529 MIR6839-201ENST00000620425 113 ntBASIC8.34□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 178.4 ms