Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SRRM4A7MD48 NOP56P2-201ENST00000447491 769 ntBASIC4.29□□□□□ -1.72
SRRM4A7MD48 AC243772.1-201ENST00000451620 410 ntBASIC4.29□□□□□ -1.72
SRRM4A7MD48 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.29□□□□□ -1.72
SRRM4A7MD48 YWHAEP1-201ENST00000453697 763 ntBASIC4.29□□□□□ -1.72
SRRM4A7MD48 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.29□□□□□ -1.72
SRRM4A7MD48 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.29□□□□□ -1.72
SRRM4A7MD48 RPL7AP52-201ENST00000458096 790 ntBASIC4.29□□□□□ -1.72
SRRM4A7MD48 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.29□□□□□ -1.72
SRRM4A7MD48 RPL23AP12-201ENST00000467573 473 ntBASIC4.29□□□□□ -1.72
SRRM4A7MD48 RPL12P24-201ENST00000474907 486 ntBASIC4.29□□□□□ -1.72
SRRM4A7MD48 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.29□□□□□ -1.72
SRRM4A7MD48 AC093763.2-201ENST00000505334 1223 ntBASIC4.29□□□□□ -1.72
SRRM4A7MD48 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.29□□□□□ -1.72
SRRM4A7MD48 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.29□□□□□ -1.72
SRRM4A7MD48 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.29□□□□□ -1.72
SRRM4A7MD48 EIF3KP3-201ENST00000514461 639 ntBASIC4.29□□□□□ -1.72
SRRM4A7MD48 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.29□□□□□ -1.72
SRRM4A7MD48 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SRRM4A7MD48 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.29□□□□□ -1.72
SRRM4A7MD48 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.29□□□□□ -1.72
SRRM4A7MD48 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.29□□□□□ -1.72
SRRM4A7MD48 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.29□□□□□ -1.72
SRRM4A7MD48 BLZF2P-201ENST00000553776 1130 ntBASIC4.29□□□□□ -1.72
SRRM4A7MD48 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.29□□□□□ -1.72
SRRM4A7MD48 AC009852.2-201ENST00000567898 485 ntBASIC4.29□□□□□ -1.72
SRRM4A7MD48 MTCYBP13-201ENST00000578634 1093 ntBASIC4.29□□□□□ -1.72
SRRM4A7MD48 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.29□□□□□ -1.72
SRRM4A7MD48 AC124283.4-201ENST00000581815 456 ntBASIC4.29□□□□□ -1.72
SRRM4A7MD48 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.29□□□□□ -1.72
SRRM4A7MD48 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.29□□□□□ -1.72
SRRM4A7MD48 AC010245.2-201ENST00000606908 1167 ntBASIC4.29□□□□□ -1.72
SRRM4A7MD48 MIR7973-1-201ENST00000614683 76 ntBASIC4.29□□□□□ -1.72
SRRM4A7MD48 MIR6778-201ENST00000617912 73 ntBASIC4.29□□□□□ -1.72
SRRM4A7MD48 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.29□□□□□ -1.72
SRRM4A7MD48 AP000943.4-201ENST00000622912 357 ntBASIC4.29□□□□□ -1.72
SRRM4A7MD48 AC083865.1-201ENST00000636634 831 ntBASIC4.29□□□□□ -1.72
SRRM4A7MD48 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.29□□□□□ -1.72
SRRM4A7MD48 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SRRM4A7MD48 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SRRM4A7MD48 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SRRM4A7MD48 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.29□□□□□ -1.72
SRRM4A7MD48 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SRRM4A7MD48 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.29□□□□□ -1.72
SRRM4A7MD48 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.29□□□□□ -1.72
SRRM4A7MD48 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SRRM4A7MD48 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SRRM4A7MD48 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.29□□□□□ -1.72
SRRM4A7MD48 AC093849.1-201ENST00000563631 2209 ntBASIC4.29□□□□□ -1.72
SRRM4A7MD48 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SRRM4A7MD48 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SRRM4A7MD48 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SRRM4A7MD48 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.29□□□□□ -1.72
SRRM4A7MD48 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SRRM4A7MD48 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.28□□□□□ -1.72
SRRM4A7MD48 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SRRM4A7MD48 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SRRM4A7MD48 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SRRM4A7MD48 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SRRM4A7MD48 AC019072.1-201ENST00000604535 1551 ntBASIC4.28□□□□□ -1.72
SRRM4A7MD48 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
SRRM4A7MD48 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SRRM4A7MD48 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SRRM4A7MD48 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.28□□□□□ -1.72
SRRM4A7MD48 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.28□□□□□ -1.72
SRRM4A7MD48 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SRRM4A7MD48 PHKBP1-201ENST00000450951 1951 ntBASIC4.28□□□□□ -1.72
SRRM4A7MD48 MIR133B-201ENST00000362210 119 ntBASIC4.28□□□□□ -1.72
SRRM4A7MD48 RNA5SP319-201ENST00000362768 119 ntBASIC4.28□□□□□ -1.72
SRRM4A7MD48 SNORA62.2-201ENST00000364672 152 ntBASIC4.28□□□□□ -1.72
SRRM4A7MD48 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SRRM4A7MD48 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.28□□□□□ -1.72
SRRM4A7MD48 ATP5F1P6-201ENST00000402768 767 ntBASIC4.28□□□□□ -1.72
SRRM4A7MD48 GSTM3P2-201ENST00000412746 530 ntBASIC4.28□□□□□ -1.72
SRRM4A7MD48 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SRRM4A7MD48 RPL12P9-201ENST00000412942 488 ntBASIC4.28□□□□□ -1.72
SRRM4A7MD48 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.28□□□□□ -1.72
SRRM4A7MD48 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.28□□□□□ -1.72
SRRM4A7MD48 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.28□□□□□ -1.72
SRRM4A7MD48 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4.28□□□□□ -1.72
SRRM4A7MD48 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.28□□□□□ -1.72
SRRM4A7MD48 UBE2D3P3-201ENST00000426992 425 ntBASIC4.28□□□□□ -1.72
SRRM4A7MD48 UBE2V1P6-201ENST00000430840 422 ntBASIC4.28□□□□□ -1.72
SRRM4A7MD48 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.28□□□□□ -1.72
SRRM4A7MD48 AC092013.1-201ENST00000438795 332 ntBASIC4.28□□□□□ -1.72
SRRM4A7MD48 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.28□□□□□ -1.72
SRRM4A7MD48 AC069540.1-201ENST00000446320 988 ntBASIC4.28□□□□□ -1.72
SRRM4A7MD48 GAPDHP25-201ENST00000447061 1001 ntBASIC4.28□□□□□ -1.72
SRRM4A7MD48 RPL31P15-201ENST00000449770 338 ntBASIC4.28□□□□□ -1.72
SRRM4A7MD48 RPL7P55-201ENST00000450522 746 ntBASIC4.28□□□□□ -1.72
SRRM4A7MD48 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.28□□□□□ -1.72
SRRM4A7MD48 RPL10P17-201ENST00000453852 316 ntBASIC4.28□□□□□ -1.72
SRRM4A7MD48 HMGB1P4-201ENST00000455362 567 ntBASIC4.28□□□□□ -1.72
SRRM4A7MD48 RPS27AP2-201ENST00000457576 465 ntBASIC4.28□□□□□ -1.72
SRRM4A7MD48 RPL35AP19-201ENST00000469425 329 ntBASIC4.28□□□□□ -1.72
SRRM4A7MD48 CBX1P5-201ENST00000475330 559 ntBASIC4.28□□□□□ -1.72
SRRM4A7MD48 RPL7P41-201ENST00000485823 957 ntBASIC4.28□□□□□ -1.72
SRRM4A7MD48 AC104687.1-201ENST00000485829 412 ntBASIC4.28□□□□□ -1.72
SRRM4A7MD48 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.28□□□□□ -1.72
SRRM4A7MD48 RPS24P16-201ENST00000497294 392 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms