Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 RNU6-354P-201ENST00000383862 107 ntBASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 RNU6-610P-201ENST00000384264 107 ntBASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 CASP3-203ENST00000393588 677 ntTSL 4 BASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 MIR1286-201ENST00000408112 78 ntBASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 TRIM60P17-201ENST00000415181 719 ntBASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 NENFP1-201ENST00000419476 466 ntBASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 CRIP1P1-201ENST00000427567 185 ntBASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 AC006335.2-201ENST00000437993 330 ntBASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 AL450023.1-201ENST00000450868 751 ntBASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 HMGB1P26-201ENST00000452520 628 ntBASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 VN1R40P-201ENST00000455196 941 ntBASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 AP001207.2-201ENST00000519490 539 ntBASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 AC078899.1-201ENST00000521432 1185 ntBASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 AC126615.2-201ENST00000553003 515 ntBASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 HNRNPCP1-201ENST00000556181 766 ntBASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 AC092868.3-201ENST00000560515 784 ntBASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 SNORD39.2-201ENST00000579995 76 ntBASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 OR7E18P-201ENST00000592589 702 ntBASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 AL513327.3-201ENST00000602618 469 ntBASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 AL022161.1-201ENST00000604390 213 ntBASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 AC067838.1-201ENST00000606064 577 ntBASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 AC021851.1-201ENST00000608537 1082 ntBASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 CASC19-264ENST00000641912 1184 ntBASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 AL161756.3-201ENST00000641216 2071 ntBASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 AC234772.1-201ENST00000377927 937 ntBASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 MIR105-2-201ENST00000385083 81 ntBASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 ATP5F1P2-201ENST00000398143 760 ntBASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 HMGB3P19-201ENST00000403971 560 ntBASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 AC010099.3-201ENST00000423896 409 ntBASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 BX119904.4-201ENST00000424402 301 ntBASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 UBE2V1P1-201ENST00000430836 445 ntBASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 AL627308.1-201ENST00000435693 821 ntBASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 RPS3AP38-201ENST00000435889 763 ntBASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 RBMY2TP-201ENST00000451162 947 ntBASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 VDAC2P4-201ENST00000452925 711 ntBASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 RPS17P11-201ENST00000474297 293 ntBASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 AC004263.1-201ENST00000479327 332 ntBASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 AC116562.1-201ENST00000485355 781 ntBASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 MTCO3P35-201ENST00000485582 781 ntBASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 AC109464.1-201ENST00000511091 819 ntBASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 OR10G5P-201ENST00000532733 358 ntBASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 AC244502.2-201ENST00000543361 851 ntBASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 NOP56P3-201ENST00000549457 385 ntBASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 AL163952.1-202ENST00000569625 600 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms