Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CUEDC1Q9NWM3 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 CD86-209ENST00000493101 1572 ntTSL 2 BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 AC011447.7-201ENST00000624228 1590 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 BX322650.1-201ENST00000332359 2143 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 EEF1A1P22-201ENST00000559385 1380 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 SNORD42.2-201ENST00000365570 69 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 MIR525-201ENST00000384978 85 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 RPS3AP36-201ENST00000398190 775 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 AL034417.1-201ENST00000399343 800 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 RNU4-61P-201ENST00000411243 107 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 FTOP1-201ENST00000419363 861 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 OR2B7P-201ENST00000429302 934 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 FTO-202ENST00000431610 707 ntTSL 3 BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 FCF1P1-201ENST00000432690 571 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 AC024082.2-201ENST00000434771 238 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 RPL7P29-201ENST00000437151 728 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 AL731892.1-201ENST00000437364 1192 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 MRPL50P4-201ENST00000446432 475 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 SLAMF6P1-201ENST00000451067 602 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 RGS5-217ENST00000451759 835 ntTSL 3 BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 AL133351.3-201ENST00000454998 193 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 AL133244.1-201ENST00000456007 258 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 Y_RNA.639-201ENST00000458981 102 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 Y_RNA.631-201ENST00000459607 101 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 RPS4XP19-201ENST00000460237 736 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 RN7SL180P-201ENST00000466769 294 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 AP005202.1-201ENST00000489915 867 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 AC008040.4-201ENST00000494834 768 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 AC012170.1-201ENST00000495139 359 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 TECRP2-201ENST00000503270 928 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 AF131216.2-201ENST00000512316 564 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 AP005597.2-201ENST00000526238 341 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 AC068631.3-201ENST00000538831 225 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 AC018630.1-201ENST00000541376 925 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 POLR2KP1-201ENST00000553226 168 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 AC019322.1-201ENST00000571869 389 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 AC024614.1-201ENST00000577546 307 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 EIF1-207ENST00000591776 797 ntTSL 4 BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 SIGLEC31P-201ENST00000594237 551 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 AC112191.3-201ENST00000604371 277 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 AC009248.2-201ENST00000619826 254 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 AL121985.2-201ENST00000621192 555 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 AC139792.3-201ENST00000623525 224 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 TPTEP1-208ENST00000636884 213 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 AC007996.1-201ENST00000620414 2821 ntBASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms