Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.35□□□□□ -1.71
KIAA1549Q9HCM3 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KIAA1549Q9HCM3 EDDM3DP-201ENST00000554692 434 ntBASIC4.35□□□□□ -1.71
KIAA1549Q9HCM3 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.35□□□□□ -1.71
KIAA1549Q9HCM3 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.35□□□□□ -1.71
KIAA1549Q9HCM3 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.35□□□□□ -1.71
KIAA1549Q9HCM3 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.35□□□□□ -1.71
KIAA1549Q9HCM3 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KIAA1549Q9HCM3 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KIAA1549Q9HCM3 DHX40P1-201ENST00000588725 1412 ntBASIC4.35□□□□□ -1.71
KIAA1549Q9HCM3 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
KIAA1549Q9HCM3 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
KIAA1549Q9HCM3 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
KIAA1549Q9HCM3 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.35□□□□□ -1.71
KIAA1549Q9HCM3 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KIAA1549Q9HCM3 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.35□□□□□ -1.71
KIAA1549Q9HCM3 AC099654.2-201ENST00000433031 1980 ntBASIC4.35□□□□□ -1.71
KIAA1549Q9HCM3 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KIAA1549Q9HCM3 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
KIAA1549Q9HCM3 AL136116.2-201ENST00000404020 785 ntBASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 RN7SKP106-201ENST00000410832 272 ntBASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 AC013429.2-201ENST00000418798 781 ntBASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 Z74021.1-201ENST00000423610 407 ntBASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 AC012512.1-201ENST00000446594 718 ntBASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 RAB9BP1-201ENST00000519581 626 ntBASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 AL359219.2-201ENST00000555184 348 ntBASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 RNA5SP332-201ENST00000391063 115 ntBASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 P2RY10P2-201ENST00000416730 913 ntBASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 COX6CP13-201ENST00000428703 226 ntBASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 NRBF2P3-201ENST00000432731 865 ntBASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 AL157385.1-201ENST00000446973 268 ntBASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 MRPL35P2-201ENST00000448009 511 ntBASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 AC234781.3-201ENST00000452540 973 ntBASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 NDUFA12P1-201ENST00000455914 406 ntBASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 RPS29P33-201ENST00000456717 146 ntBASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 RN7SL244P-201ENST00000493405 297 ntBASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 RNA5SP230-201ENST00000517039 122 ntBASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 AC105031.1-201ENST00000518550 476 ntBASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.34□□□□□ -1.71
KIAA1549Q9HCM3 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.72
KIAA1549Q9HCM3 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
KIAA1549Q9HCM3 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.34□□□□□ -1.72
KIAA1549Q9HCM3 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
KIAA1549Q9HCM3 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 AL672167.1-204ENST00000641875 3017 ntBASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 AL132640.2-201ENST00000559968 1698 ntBASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 AC007382.1-201ENST00000624376 2618 ntBASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 EIF4A1P1-201ENST00000420241 934 ntBASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 AC005154.2-201ENST00000438110 379 ntBASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 AL138878.2-201ENST00000440581 1241 ntBASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 AL450023.3-201ENST00000440592 271 ntBASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 AC013356.1-201ENST00000489027 564 ntBASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 RNU2-30P-201ENST00000516209 141 ntBASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 GTF2IP11-201ENST00000526931 420 ntBASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 AC090286.3-201ENST00000573133 187 ntBASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 AL121950.1-201ENST00000624993 2077 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms