Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 AC009120.3-201ENST00000563335 499 ntBASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 OR4G1P-201ENST00000588632 938 ntBASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 AC011500.1-201ENST00000601963 469 ntBASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 AC083899.3-201ENST00000603413 594 ntBASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 AC018618.2-201ENST00000604770 446 ntBASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 AC018714.1-201ENST00000605028 208 ntBASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 AL008723.3-201ENST00000608926 449 ntBASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 AL159169.2-201ENST00000610061 1269 ntBASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 AC099654.10-201ENST00000640395 161 ntBASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 BIN2P1-201ENST00000504996 1530 ntBASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 ATP5HP3-201ENST00000396994 486 ntBASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 RNU2-66P-201ENST00000410650 161 ntBASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 RPS17P17-201ENST00000419392 409 ntBASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 AC027644.1-201ENST00000419595 298 ntBASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 AC092967.1-201ENST00000449016 481 ntBASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 PDCL3P4-201ENST00000489621 720 ntBASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 AL117692.1-201ENST00000494283 713 ntBASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 AC096751.1-202ENST00000502691 1067 ntBASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 AC147055.4-201ENST00000504399 745 ntBASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 RPL37P25-201ENST00000507308 276 ntBASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 AC006499.4-201ENST00000510947 694 ntBASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 RNA5SP418-201ENST00000515951 117 ntBASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 NPM1P6-201ENST00000521088 871 ntBASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 OR5AZ1P-201ENST00000527448 943 ntBASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 AC135983.3-201ENST00000528049 1226 ntBASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 SERPINE4P-201ENST00000554978 281 ntBASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 AL121579.2-201ENST00000555466 590 ntBASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 AC092325.1-201ENST00000566449 554 ntBASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 ELOCP28-201ENST00000590044 317 ntBASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 AC073046.2-201ENST00000604756 527 ntBASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 AL021368.3-201ENST00000607119 578 ntBASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 AC011477.1-204ENST00000623416 1325 ntBASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 MTND4P29-201ENST00000503122 1372 ntBASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 CASC19-206ENST00000641028 1430 ntBASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 MAPK10-287ENST00000641217 3037 ntBASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SEC61A2Q9H9S3 KARSP1-201ENST00000451871 1752 ntBASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 AC119674.1-202ENST00000641333 1860 ntBASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms