Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC104634.1-201ENST00000452720 462 ntBASIC7.18□□□□□ -1.26
USB1Q9BQ65 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC7.18□□□□□ -1.26
USB1Q9BQ65 RPL12P25-201ENST00000455592 494 ntBASIC7.18□□□□□ -1.26
USB1Q9BQ65 PFN1P6-201ENST00000476786 399 ntBASIC7.18□□□□□ -1.26
USB1Q9BQ65 AC126389.1-201ENST00000477436 290 ntBASIC7.18□□□□□ -1.26
USB1Q9BQ65 AC104564.1-201ENST00000493028 407 ntBASIC7.18□□□□□ -1.26
USB1Q9BQ65 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC7.18□□□□□ -1.26
USB1Q9BQ65 RNU6-635P-201ENST00000516651 102 ntBASIC7.18□□□□□ -1.26
USB1Q9BQ65 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC7.18□□□□□ -1.26
USB1Q9BQ65 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC7.18□□□□□ -1.26
USB1Q9BQ65 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC7.18□□□□□ -1.26
USB1Q9BQ65 OR5M4P-201ENST00000529436 925 ntBASIC7.18□□□□□ -1.26
USB1Q9BQ65 AC023442.1-201ENST00000531247 422 ntBASIC7.18□□□□□ -1.26
USB1Q9BQ65 AL160314.2-202ENST00000553792 534 ntTSL 5 BASIC7.18□□□□□ -1.26
USB1Q9BQ65 NPM1P42-201ENST00000560329 862 ntBASIC7.18□□□□□ -1.26
USB1Q9BQ65 AC034105.2-201ENST00000561866 238 ntBASIC7.18□□□□□ -1.26
USB1Q9BQ65 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC7.18□□□□□ -1.26
USB1Q9BQ65 AC022884.3-201ENST00000579571 248 ntBASIC7.18□□□□□ -1.26
USB1Q9BQ65 AC015818.6-201ENST00000584274 634 ntBASIC7.18□□□□□ -1.26
USB1Q9BQ65 AC090774.2-201ENST00000584708 322 ntBASIC7.18□□□□□ -1.26
USB1Q9BQ65 AC026898.1-201ENST00000586404 571 ntBASIC7.18□□□□□ -1.26
USB1Q9BQ65 TEX41-238ENST00000604253 709 ntTSL 5 BASIC7.18□□□□□ -1.26
USB1Q9BQ65 AL590560.2-201ENST00000608430 732 ntBASIC7.18□□□□□ -1.26
USB1Q9BQ65 RN7SL82P-201ENST00000611435 237 ntBASIC7.18□□□□□ -1.26
USB1Q9BQ65 AL157817.1-201ENST00000614264 790 ntBASIC7.18□□□□□ -1.26
USB1Q9BQ65 RN7SL628P-201ENST00000619139 237 ntBASIC7.18□□□□□ -1.26
USB1Q9BQ65 OR52H1-202ENST00000641796 1061 ntBASIC7.18□□□□□ -1.26
USB1Q9BQ65 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
USB1Q9BQ65 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
USB1Q9BQ65 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
USB1Q9BQ65 AC109780.1-201ENST00000451768 1344 ntBASIC7.18□□□□□ -1.26
USB1Q9BQ65 AL355377.1-201ENST00000621125 1653 ntBASIC7.18□□□□□ -1.26
USB1Q9BQ65 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
USB1Q9BQ65 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
USB1Q9BQ65 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
USB1Q9BQ65 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC7.18□□□□□ -1.26
USB1Q9BQ65 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
USB1Q9BQ65 PIWIL4-201ENST00000299001 3199 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
USB1Q9BQ65 CD274-202ENST00000381577 3644 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
USB1Q9BQ65 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
USB1Q9BQ65 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
USB1Q9BQ65 AL591543.1-202ENST00000642095 4149 ntBASIC7.17□□□□□ -1.26
USB1Q9BQ65 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC7.17□□□□□ -1.26
USB1Q9BQ65 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC7.17□□□□□ -1.26
USB1Q9BQ65 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
USB1Q9BQ65 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC7.17□□□□□ -1.26
USB1Q9BQ65 NELL2-202ENST00000395487 3203 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
USB1Q9BQ65 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
USB1Q9BQ65 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
USB1Q9BQ65 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC7.17□□□□□ -1.26
USB1Q9BQ65 RPL32P3-201ENST00000359025 275 ntBASIC7.17□□□□□ -1.26
USB1Q9BQ65 RNA5SP263-201ENST00000363376 128 ntBASIC7.17□□□□□ -1.26
USB1Q9BQ65 U3.12-201ENST00000364498 214 ntBASIC7.17□□□□□ -1.26
USB1Q9BQ65 AC008171.1-201ENST00000395058 200 ntBASIC7.17□□□□□ -1.26
USB1Q9BQ65 RN7SKP106-201ENST00000410832 272 ntBASIC7.17□□□□□ -1.26
USB1Q9BQ65 AL590609.2-201ENST00000421430 368 ntBASIC7.17□□□□□ -1.26
USB1Q9BQ65 GAPDHP69-201ENST00000425504 1008 ntBASIC7.17□□□□□ -1.26
USB1Q9BQ65 AL356387.1-201ENST00000426321 476 ntTSL 3 BASIC7.17□□□□□ -1.26
USB1Q9BQ65 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC7.17□□□□□ -1.26
USB1Q9BQ65 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC7.17□□□□□ -1.26
USB1Q9BQ65 AC073069.1-201ENST00000428657 441 ntBASIC7.17□□□□□ -1.26
USB1Q9BQ65 FABP7P2-201ENST00000429946 379 ntBASIC7.17□□□□□ -1.26
USB1Q9BQ65 FABP5P14-201ENST00000437273 393 ntBASIC7.17□□□□□ -1.26
USB1Q9BQ65 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC7.17□□□□□ -1.26
USB1Q9BQ65 PRPS1P1-201ENST00000445305 876 ntBASIC7.17□□□□□ -1.26
USB1Q9BQ65 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC7.17□□□□□ -1.26
USB1Q9BQ65 RNU7-66P-201ENST00000459469 62 ntBASIC7.17□□□□□ -1.26
USB1Q9BQ65 RN7SL74P-201ENST00000464966 299 ntBASIC7.17□□□□□ -1.26
USB1Q9BQ65 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.17□□□□□ -1.26
USB1Q9BQ65 UBFD1P1-201ENST00000473259 814 ntBASIC7.17□□□□□ -1.26
USB1Q9BQ65 RPL5P22-201ENST00000480199 884 ntBASIC7.17□□□□□ -1.26
USB1Q9BQ65 AC015911.1-201ENST00000495111 156 ntBASIC7.17□□□□□ -1.26
USB1Q9BQ65 AC023794.3-204ENST00000510754 236 ntBASIC7.17□□□□□ -1.26
USB1Q9BQ65 GNPDA1-212ENST00000513454 980 ntTSL 5 BASIC7.17□□□□□ -1.26
USB1Q9BQ65 NTAN1P2-201ENST00000515730 940 ntBASIC7.17□□□□□ -1.26
USB1Q9BQ65 SNORD27.1-201ENST00000516319 72 ntBASIC7.17□□□□□ -1.26
USB1Q9BQ65 SCARNA20.3-201ENST00000516913 131 ntBASIC7.17□□□□□ -1.26
USB1Q9BQ65 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC7.17□□□□□ -1.26
USB1Q9BQ65 AC022778.1-201ENST00000518302 545 ntTSL 3 BASIC7.17□□□□□ -1.26
USB1Q9BQ65 AC008562.1-201ENST00000521763 330 ntBASIC7.17□□□□□ -1.26
USB1Q9BQ65 AP002957.1-201ENST00000525952 406 ntTSL 3 BASIC7.17□□□□□ -1.26
USB1Q9BQ65 AP003032.2-201ENST00000533697 686 ntTSL 3 BASIC7.17□□□□□ -1.26
USB1Q9BQ65 AC008126.1-201ENST00000549019 480 ntBASIC7.17□□□□□ -1.26
USB1Q9BQ65 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC7.17□□□□□ -1.26
USB1Q9BQ65 AC027808.2-203ENST00000558261 638 ntTSL 5 BASIC7.17□□□□□ -1.26
USB1Q9BQ65 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC7.17□□□□□ -1.26
USB1Q9BQ65 TUBAP4-201ENST00000569261 416 ntBASIC7.17□□□□□ -1.26
USB1Q9BQ65 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
USB1Q9BQ65 AC012603.1-201ENST00000606424 528 ntBASIC7.17□□□□□ -1.26
USB1Q9BQ65 AC084876.1-201ENST00000612793 641 ntBASIC7.17□□□□□ -1.26
USB1Q9BQ65 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC7.17□□□□□ -1.26
USB1Q9BQ65 AC245407.2-201ENST00000614199 451 ntBASIC7.17□□□□□ -1.26
USB1Q9BQ65 AL109806.1-201ENST00000623967 1248 ntBASIC7.17□□□□□ -1.26
USB1Q9BQ65 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC7.17□□□□□ -1.26
USB1Q9BQ65 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC7.17□□□□□ -1.26
USB1Q9BQ65 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC7.17□□□□□ -1.26
USB1Q9BQ65 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
USB1Q9BQ65 CDY1B-202ENST00000382407 2227 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
USB1Q9BQ65 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
USB1Q9BQ65 MAP3K13-203ENST00000424227 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms