Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 DDX18P5-201ENST00000534547 1306 ntBASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 RNU4-4P-201ENST00000364588 130 ntBASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 BX119321.1-201ENST00000428912 797 ntBASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 RPS7P2-201ENST00000435134 607 ntBASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 ISCA1P2-201ENST00000438679 421 ntBASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 AL161636.2-201ENST00000445179 927 ntBASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 HMGN1P36-201ENST00000446623 298 ntBASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 OSTCP1-201ENST00000455507 450 ntBASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 SETP20-201ENST00000457046 852 ntBASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 RNU7-125P-201ENST00000458760 62 ntBASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 CREM-220ENST00000463314 964 ntTSL 2 BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 AL157777.1-201ENST00000468100 304 ntBASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 LTV1P1-201ENST00000510683 1237 ntBASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 TMEM97P2-201ENST00000517841 403 ntBASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 IGLVIV-64-201ENST00000518581 301 ntBASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 HMGB1P1-201ENST00000522557 636 ntBASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 IGKV3D-34-201ENST00000522638 302 ntBASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 EEF1B2P4-201ENST00000551398 348 ntBASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 AC069366.1-201ENST00000583159 838 ntBASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 AC073648.5-201ENST00000603502 305 ntBASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 AP000811.1-201ENST00000603803 651 ntBASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 AC124312.4-201ENST00000605533 310 ntBASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 AL139286.2-201ENST00000606838 396 ntBASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 TUG1_1.1-201ENST00000610654 145 ntBASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 AC092794.1-201ENST00000612734 582 ntBASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 AC244258.1-201ENST00000637553 1071 ntBASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 AC087565.3-203ENST00000641018 837 ntBASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 AL390237.1-201ENST00000404226 1415 ntBASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 AC140134.1-201ENST00000511830 3544 ntBASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CDK5RAP1Q96SZ6 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 AC234772.1-201ENST00000377927 937 ntBASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 RNU6-1320P-201ENST00000390838 107 ntBASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 RNU6-1269P-201ENST00000391139 107 ntBASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 HMGB3P19-201ENST00000403971 560 ntBASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 AC093155.2-201ENST00000420734 937 ntBASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 RPL12P16-201ENST00000431098 498 ntBASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 AC044797.1-201ENST00000445744 679 ntBASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 RNU6-599P-201ENST00000459383 107 ntBASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 RNU6-1193P-201ENST00000459461 107 ntBASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 RN7SL570P-201ENST00000484405 292 ntBASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 NAA50-206ENST00000493454 964 ntTSL 2 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms