Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.71□□□□□ -1.66
COL21A1Q96P44 AC015660.5-201ENST00000623238 564 ntBASIC4.71□□□□□ -1.66
COL21A1Q96P44 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.71□□□□□ -1.66
COL21A1Q96P44 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL21A1Q96P44 AC092111.2-201ENST00000611627 1414 ntBASIC4.71□□□□□ -1.66
COL21A1Q96P44 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.7□□□□□ -1.66
COL21A1Q96P44 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL21A1Q96P44 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.7□□□□□ -1.66
COL21A1Q96P44 THAP12P4-201ENST00000528321 2266 ntBASIC4.7□□□□□ -1.66
COL21A1Q96P44 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COL21A1Q96P44 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.7□□□□□ -1.66
COL21A1Q96P44 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL21A1Q96P44 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL21A1Q96P44 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.7□□□□□ -1.66
COL21A1Q96P44 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COL21A1Q96P44 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
COL21A1Q96P44 SNURFL-201ENST00000309296 343 ntBASIC4.7□□□□□ -1.66
COL21A1Q96P44 AL353625.1-202ENST00000366273 571 ntBASIC4.7□□□□□ -1.66
COL21A1Q96P44 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
COL21A1Q96P44 MIR765-201ENST00000390226 114 ntBASIC4.7□□□□□ -1.66
COL21A1Q96P44 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.7□□□□□ -1.66
COL21A1Q96P44 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.7□□□□□ -1.66
COL21A1Q96P44 EIF4A1P1-201ENST00000420241 934 ntBASIC4.7□□□□□ -1.66
COL21A1Q96P44 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.7□□□□□ -1.66
COL21A1Q96P44 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.7□□□□□ -1.66
COL21A1Q96P44 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.7□□□□□ -1.66
COL21A1Q96P44 TXNP5-201ENST00000441043 315 ntBASIC4.7□□□□□ -1.66
COL21A1Q96P44 AP002371.1-201ENST00000463604 433 ntBASIC4.7□□□□□ -1.66
COL21A1Q96P44 AC109462.1-201ENST00000491087 368 ntBASIC4.7□□□□□ -1.66
COL21A1Q96P44 AC093890.1-201ENST00000502554 540 ntBASIC4.7□□□□□ -1.66
COL21A1Q96P44 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.7□□□□□ -1.66
COL21A1Q96P44 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.7□□□□□ -1.66
COL21A1Q96P44 RN7SKP66-201ENST00000516681 231 ntBASIC4.7□□□□□ -1.66
COL21A1Q96P44 KCTD9P6-201ENST00000522306 950 ntBASIC4.7□□□□□ -1.66
COL21A1Q96P44 HNRNPRP2-201ENST00000528421 743 ntBASIC4.7□□□□□ -1.66
COL21A1Q96P44 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.7□□□□□ -1.66
COL21A1Q96P44 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.7□□□□□ -1.66
COL21A1Q96P44 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COL21A1Q96P44 AL136295.6-201ENST00000610486 658 ntBASIC4.7□□□□□ -1.66
COL21A1Q96P44 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.7□□□□□ -1.66
COL21A1Q96P44 MAPK10-320ENST00000641462 6696 ntBASIC4.7□□□□□ -1.66
COL21A1Q96P44 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COL21A1Q96P44 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL21A1Q96P44 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COL21A1Q96P44 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.7□□□□□ -1.66
COL21A1Q96P44 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
COL21A1Q96P44 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COL21A1Q96P44 MIPEPP2-201ENST00000422560 1819 ntBASIC4.69□□□□□ -1.66
COL21A1Q96P44 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.69□□□□□ -1.66
COL21A1Q96P44 AC133552.1-201ENST00000569988 4007 ntBASIC4.69□□□□□ -1.66
COL21A1Q96P44 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
COL21A1Q96P44 BTBD10P1-201ENST00000549824 1352 ntBASIC4.69□□□□□ -1.66
COL21A1Q96P44 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.69□□□□□ -1.66
COL21A1Q96P44 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL21A1Q96P44 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL21A1Q96P44 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
COL21A1Q96P44 RNU4-44P-201ENST00000363050 141 ntBASIC4.69□□□□□ -1.66
COL21A1Q96P44 RNA5SP507-201ENST00000363603 121 ntBASIC4.69□□□□□ -1.66
COL21A1Q96P44 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
COL21A1Q96P44 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.69□□□□□ -1.66
COL21A1Q96P44 RN7SKP213-201ENST00000410746 298 ntBASIC4.69□□□□□ -1.66
COL21A1Q96P44 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.69□□□□□ -1.66
COL21A1Q96P44 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.69□□□□□ -1.66
COL21A1Q96P44 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.69□□□□□ -1.66
COL21A1Q96P44 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.69□□□□□ -1.66
COL21A1Q96P44 RPS26P4-201ENST00000431743 355 ntBASIC4.69□□□□□ -1.66
COL21A1Q96P44 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.69□□□□□ -1.66
COL21A1Q96P44 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.69□□□□□ -1.66
COL21A1Q96P44 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.69□□□□□ -1.66
COL21A1Q96P44 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.69□□□□□ -1.66
COL21A1Q96P44 OR52Y1P-201ENST00000452418 828 ntBASIC4.69□□□□□ -1.66
COL21A1Q96P44 SEPT7P3-201ENST00000455017 621 ntBASIC4.69□□□□□ -1.66
COL21A1Q96P44 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.69□□□□□ -1.66
COL21A1Q96P44 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.69□□□□□ -1.66
COL21A1Q96P44 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.69□□□□□ -1.66
COL21A1Q96P44 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.69□□□□□ -1.66
COL21A1Q96P44 AC090686.1-201ENST00000481577 749 ntBASIC4.69□□□□□ -1.66
COL21A1Q96P44 RPSAP50-201ENST00000481955 852 ntBASIC4.69□□□□□ -1.66
COL21A1Q96P44 AC004815.1-201ENST00000484185 331 ntBASIC4.69□□□□□ -1.66
COL21A1Q96P44 AC008638.1-201ENST00000506035 866 ntBASIC4.69□□□□□ -1.66
COL21A1Q96P44 AC147055.3-201ENST00000510547 851 ntBASIC4.69□□□□□ -1.66
COL21A1Q96P44 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.69□□□□□ -1.66
COL21A1Q96P44 RFPL4AP5-201ENST00000514977 504 ntBASIC4.69□□□□□ -1.66
COL21A1Q96P44 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.69□□□□□ -1.66
COL21A1Q96P44 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.69□□□□□ -1.66
COL21A1Q96P44 AL512310.9-201ENST00000553311 948 ntBASIC4.69□□□□□ -1.66
COL21A1Q96P44 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.69□□□□□ -1.66
COL21A1Q96P44 RNF138P2-201ENST00000603490 592 ntBASIC4.69□□□□□ -1.66
COL21A1Q96P44 AC016769.4-201ENST00000616893 535 ntBASIC4.69□□□□□ -1.66
COL21A1Q96P44 AP003400.2-201ENST00000624036 666 ntBASIC4.69□□□□□ -1.66
COL21A1Q96P44 TMEM30CP-203ENST00000637814 1035 ntBASIC4.69□□□□□ -1.66
COL21A1Q96P44 LINC01739-205ENST00000641890 573 ntBASIC4.69□□□□□ -1.66
COL21A1Q96P44 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL21A1Q96P44 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.69□□□□□ -1.66
COL21A1Q96P44 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.69□□□□□ -1.66
COL21A1Q96P44 RBPJP2-201ENST00000618187 1444 ntBASIC4.69□□□□□ -1.66
COL21A1Q96P44 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.69□□□□□ -1.66
COL21A1Q96P44 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL21A1Q96P44 NEAT1-202ENST00000501122 22743 ntBASIC4.69□□□□□ -1.66
COL21A1Q96P44 NXF4-202ENST00000416098 1465 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms