Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 DEFA9P-201ENST00000433042 285 ntBASIC5.56□□□□□ -1.52
VPS50Q96JG6 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS50Q96JG6 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VPS50Q96JG6 NANOGP9-201ENST00000439890 892 ntBASIC5.56□□□□□ -1.52
VPS50Q96JG6 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.56□□□□□ -1.52
VPS50Q96JG6 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS50Q96JG6 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS50Q96JG6 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VPS50Q96JG6 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS50Q96JG6 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VPS50Q96JG6 AL031313.1-201ENST00000448435 256 ntBASIC5.56□□□□□ -1.52
VPS50Q96JG6 CYCSP42-201ENST00000450823 238 ntBASIC5.56□□□□□ -1.52
VPS50Q96JG6 AC083899.1-201ENST00000454465 3819 ntBASIC5.56□□□□□ -1.52
VPS50Q96JG6 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.56□□□□□ -1.52
VPS50Q96JG6 RNU1-88P-201ENST00000459274 128 ntBASIC5.56□□□□□ -1.52
VPS50Q96JG6 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.56□□□□□ -1.52
VPS50Q96JG6 RN7SL174P-201ENST00000475578 289 ntBASIC5.56□□□□□ -1.52
VPS50Q96JG6 AC107398.1-201ENST00000486904 505 ntBASIC5.56□□□□□ -1.52
VPS50Q96JG6 RPS27AP16-201ENST00000492222 470 ntBASIC5.56□□□□□ -1.52
VPS50Q96JG6 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.56□□□□□ -1.52
VPS50Q96JG6 NENFP3-201ENST00000503735 313 ntBASIC5.56□□□□□ -1.52
VPS50Q96JG6 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.56□□□□□ -1.52
VPS50Q96JG6 AC011411.1-201ENST00000509592 876 ntBASIC5.56□□□□□ -1.52
VPS50Q96JG6 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS50Q96JG6 MTCYBP19-201ENST00000517463 1124 ntBASIC5.56□□□□□ -1.52
VPS50Q96JG6 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS50Q96JG6 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS50Q96JG6 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC5.56□□□□□ -1.52
VPS50Q96JG6 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS50Q96JG6 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS50Q96JG6 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS50Q96JG6 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS50Q96JG6 AP005262.1-201ENST00000582646 997 ntBASIC5.56□□□□□ -1.52
VPS50Q96JG6 AC068020.1-201ENST00000594215 661 ntBASIC5.56□□□□□ -1.52
VPS50Q96JG6 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS50Q96JG6 AC234772.3-201ENST00000602277 528 ntBASIC5.56□□□□□ -1.52
VPS50Q96JG6 AC130352.1-201ENST00000602979 661 ntBASIC5.56□□□□□ -1.52
VPS50Q96JG6 AL365400.2-201ENST00000605604 902 ntBASIC5.56□□□□□ -1.52
VPS50Q96JG6 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.56□□□□□ -1.52
VPS50Q96JG6 AC106052.1-201ENST00000608029 497 ntBASIC5.56□□□□□ -1.52
VPS50Q96JG6 AL359513.1-201ENST00000614364 557 ntBASIC5.56□□□□□ -1.52
VPS50Q96JG6 AC009464.1-201ENST00000615731 469 ntBASIC5.56□□□□□ -1.52
VPS50Q96JG6 AL355974.3-201ENST00000617383 467 ntBASIC5.56□□□□□ -1.52
VPS50Q96JG6 AL445670.1-201ENST00000618889 801 ntBASIC5.56□□□□□ -1.52
VPS50Q96JG6 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS50Q96JG6 AC136428.4-201ENST00000634254 1155 ntBASIC5.56□□□□□ -1.52
VPS50Q96JG6 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VPS50Q96JG6 PSG10P-201ENST00000501199 1500 ntBASIC5.56□□□□□ -1.52
VPS50Q96JG6 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VPS50Q96JG6 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
VPS50Q96JG6 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VPS50Q96JG6 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VPS50Q96JG6 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS50Q96JG6 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS50Q96JG6 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS50Q96JG6 CR788268.1-201ENST00000603931 1809 ntBASIC5.55□□□□□ -1.52
VPS50Q96JG6 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS50Q96JG6 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VPS50Q96JG6 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS50Q96JG6 RN7SKP185-201ENST00000362813 326 ntBASIC5.55□□□□□ -1.52
VPS50Q96JG6 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS50Q96JG6 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS50Q96JG6 AL034403.1-201ENST00000399414 885 ntBASIC5.55□□□□□ -1.52
VPS50Q96JG6 LYPLA1P3-201ENST00000402650 695 ntBASIC5.55□□□□□ -1.52
VPS50Q96JG6 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 CRIP1P1-201ENST00000427567 185 ntBASIC5.55□□□□□ -1.52
VPS50Q96JG6 PCBP2P1-201ENST00000437262 977 ntBASIC5.55□□□□□ -1.52
VPS50Q96JG6 AC000041.1-201ENST00000439655 175 ntBASIC5.55□□□□□ -1.52
VPS50Q96JG6 AL391987.1-201ENST00000441025 200 ntBASIC5.55□□□□□ -1.52
VPS50Q96JG6 AC015983.1-201ENST00000441577 373 ntBASIC5.55□□□□□ -1.52
VPS50Q96JG6 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 SDC4P-201ENST00000453285 601 ntBASIC5.55□□□□□ -1.52
VPS50Q96JG6 AL603882.1-201ENST00000463059 681 ntBASIC5.55□□□□□ -1.52
VPS50Q96JG6 RN7SL269P-201ENST00000467795 305 ntBASIC5.55□□□□□ -1.52
VPS50Q96JG6 RN7SL188P-201ENST00000469842 285 ntBASIC5.55□□□□□ -1.52
VPS50Q96JG6 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VPS50Q96JG6 RPS12P31-201ENST00000491419 398 ntBASIC5.55□□□□□ -1.52
VPS50Q96JG6 OR7E157P-201ENST00000494376 911 ntBASIC5.55□□□□□ -1.52
VPS50Q96JG6 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 PRELID3BP5-201ENST00000508612 460 ntBASIC5.55□□□□□ -1.52
VPS50Q96JG6 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 HMGN2P36-201ENST00000529541 409 ntBASIC5.55□□□□□ -1.52
VPS50Q96JG6 OR8K4P-201ENST00000534608 872 ntBASIC5.55□□□□□ -1.52
VPS50Q96JG6 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.55□□□□□ -1.52
VPS50Q96JG6 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms