Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 OR10T1P-201ENST00000424327 947 ntBASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 MRPS21P2-201ENST00000424704 264 ntBASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 MTCYBP42-201ENST00000444653 1130 ntBASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 RPL31P15-201ENST00000449770 338 ntBASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 SNORD125-201ENST00000459538 96 ntBASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 AC069528.1-202ENST00000482888 637 ntBASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 AC034244.1-201ENST00000507687 207 ntBASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 AC074087.1-201ENST00000512059 724 ntBASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 MTATP6P1-201ENST00000514057 681 ntBASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 IGLV3-24-201ENST00000517477 197 ntBASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 DEFB130C-202ENST00000530001 230 ntBASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 OR11H3P-201ENST00000554547 982 ntBASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 AC009094.1-201ENST00000564443 426 ntBASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 CYP2C60P-201ENST00000566088 139 ntBASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 MIR4311-201ENST00000580794 100 ntBASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 AC025857.2-201ENST00000602711 238 ntBASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 AC002069.2-201ENST00000603580 883 ntBASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 OR8G7P-201ENST00000616658 848 ntBASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 FRG1HP-204ENST00000617940 757 ntBASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 AC127024.6-201ENST00000621598 424 ntBASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 AC000095.2-202ENST00000637415 154 ntBASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 AC087565.3-203ENST00000641018 837 ntBASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 AC073055.1-201ENST00000456901 1621 ntBASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 VN2R3P-201ENST00000422626 1412 ntBASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
CTHRC1Q96CG8 AC107021.2-201ENST00000567714 2095 ntBASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 LINC01963-201ENST00000562038 3148 ntBASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 AC017079.1-201ENST00000333650 415 ntBASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 RNA5SP131-201ENST00000365452 119 ntBASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 Y_RNA.472-201ENST00000384322 102 ntBASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 SNORD116-8-201ENST00000384365 95 ntBASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 RNU6-1242P-201ENST00000391052 103 ntBASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 AC087752.1-201ENST00000391360 558 ntBASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 AC092642.1-201ENST00000392417 425 ntBASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 AC005042.1-201ENST00000393397 800 ntBASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 TXNL1P1-201ENST00000429528 554 ntBASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 PTENP1-201ENST00000447117 1215 ntBASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 AL596266.1-201ENST00000448132 400 ntBASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 RPS23P9-201ENST00000448848 438 ntBASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 SETP20-201ENST00000457046 852 ntBASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 NXT1P1-201ENST00000458481 316 ntBASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 MRE11P1-201ENST00000464884 2127 ntBASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 RN7SL273P-201ENST00000481561 299 ntBASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 RPS17P5-201ENST00000498293 408 ntBASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 SUMO2P4-201ENST00000504193 276 ntBASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 AC138866.2-201ENST00000508650 584 ntBASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 AC117522.2-201ENST00000510049 657 ntBASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 RNU6-615P-201ENST00000516065 106 ntBASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 Y_RNA.688-201ENST00000516565 95 ntBASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 IGLVIV-64-201ENST00000518581 301 ntBASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 AC027104.1-201ENST00000563702 681 ntBASIC5.28□□□□□ -1.56
CTHRC1Q96CG8 AC095057.3-201ENST00000567102 1157 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms