Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 AC079168.2-201ENST00000453977 416 ntBASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 GTF2IP11-201ENST00000526931 420 ntBASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 AC103792.1-201ENST00000603591 919 ntBASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 AC006338.2-201ENST00000616864 791 ntBASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 AC112694.2-201ENST00000623697 768 ntBASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 AL034370.1-201ENST00000397254 1590 ntBASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 AC100778.3-201ENST00000580060 1750 ntBASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 DHX9P1-201ENST00000436565 3076 ntBASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 AL731532.2-201ENST00000623542 1953 ntBASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 RNU6-398P-201ENST00000384143 109 ntBASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 AC069213.2-201ENST00000420238 366 ntBASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 E2F6P2-201ENST00000420708 748 ntBASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 RNA5SP143-201ENST00000516936 115 ntBASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 AC105031.1-201ENST00000518550 476 ntBASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 EDDM3DP-201ENST00000554692 434 ntBASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 AC010503.3-201ENST00000594355 540 ntBASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 AC087821.1-201ENST00000623639 567 ntBASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.02□□□□□ -1.61
SHROOM3Q8TF72 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SHROOM3Q8TF72 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SHROOM3Q8TF72 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SHROOM3Q8TF72 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
SHROOM3Q8TF72 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
SHROOM3Q8TF72 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SHROOM3Q8TF72 THAP12P5-201ENST00000405864 2275 ntBASIC5.01□□□□□ -1.61
SHROOM3Q8TF72 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SHROOM3Q8TF72 MIR23B-201ENST00000384832 97 ntBASIC5.01□□□□□ -1.61
SHROOM3Q8TF72 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.01□□□□□ -1.61
SHROOM3Q8TF72 COX6CP13-201ENST00000428703 226 ntBASIC5.01□□□□□ -1.61
SHROOM3Q8TF72 AC234781.3-201ENST00000452540 973 ntBASIC5.01□□□□□ -1.61
SHROOM3Q8TF72 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.01□□□□□ -1.61
SHROOM3Q8TF72 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.01□□□□□ -1.61
SHROOM3Q8TF72 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.01□□□□□ -1.61
SHROOM3Q8TF72 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.01□□□□□ -1.61
SHROOM3Q8TF72 MIR4675-201ENST00000577898 77 ntBASIC5.01□□□□□ -1.61
SHROOM3Q8TF72 CCDC58P3-201ENST00000590792 430 ntBASIC5.01□□□□□ -1.61
SHROOM3Q8TF72 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.01□□□□□ -1.61
SHROOM3Q8TF72 AC243960.7-201ENST00000623532 707 ntBASIC5.01□□□□□ -1.61
SHROOM3Q8TF72 AC104623.2-202ENST00000623477 4002 ntBASIC5.01□□□□□ -1.61
SHROOM3Q8TF72 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SHROOM3Q8TF72 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SHROOM3Q8TF72 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SHROOM3Q8TF72 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5□□□□□ -1.61
SHROOM3Q8TF72 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5□□□□□ -1.61
SHROOM3Q8TF72 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5□□□□□ -1.61
SHROOM3Q8TF72 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SHROOM3Q8TF72 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
SHROOM3Q8TF72 OR2B7P-201ENST00000429302 934 ntBASIC5□□□□□ -1.61
SHROOM3Q8TF72 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5□□□□□ -1.61
SHROOM3Q8TF72 SLC25A18P1-201ENST00000449385 454 ntBASIC5□□□□□ -1.61
SHROOM3Q8TF72 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5□□□□□ -1.61
SHROOM3Q8TF72 AC116562.1-201ENST00000485355 781 ntBASIC5□□□□□ -1.61
SHROOM3Q8TF72 HMGN2P25-201ENST00000486956 268 ntBASIC5□□□□□ -1.61
SHROOM3Q8TF72 CREM-238ENST00000488741 651 ntTSL 2 BASIC5□□□□□ -1.61
SHROOM3Q8TF72 RPL21P129-201ENST00000491732 478 ntBASIC5□□□□□ -1.61
SHROOM3Q8TF72 AC034205.1-201ENST00000520621 638 ntBASIC5□□□□□ -1.61
SHROOM3Q8TF72 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5□□□□□ -1.61
SHROOM3Q8TF72 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5□□□□□ -1.61
SHROOM3Q8TF72 AP001521.2-201ENST00000608772 546 ntBASIC5□□□□□ -1.61
SHROOM3Q8TF72 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5□□□□□ -1.61
SHROOM3Q8TF72 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SHROOM3Q8TF72 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5□□□□□ -1.61
SHROOM3Q8TF72 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5□□□□□ -1.61
SHROOM3Q8TF72 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5□□□□□ -1.61
SHROOM3Q8TF72 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5□□□□□ -1.61
SHROOM3Q8TF72 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5□□□□□ -1.61
SHROOM3Q8TF72 RNU2-50P-201ENST00000410494 143 ntBASIC5□□□□□ -1.61
SHROOM3Q8TF72 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5□□□□□ -1.61
SHROOM3Q8TF72 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5□□□□□ -1.61
SHROOM3Q8TF72 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5□□□□□ -1.61
SHROOM3Q8TF72 AC013356.1-201ENST00000489027 564 ntBASIC5□□□□□ -1.61
SHROOM3Q8TF72 MRPS33P2-201ENST00000507850 322 ntBASIC5□□□□□ -1.61
SHROOM3Q8TF72 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5□□□□□ -1.61
SHROOM3Q8TF72 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5□□□□□ -1.61
SHROOM3Q8TF72 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5□□□□□ -1.61
SHROOM3Q8TF72 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5□□□□□ -1.61
SHROOM3Q8TF72 AC138701.1-201ENST00000524329 714 ntBASIC5□□□□□ -1.61
SHROOM3Q8TF72 MIR5699-201ENST00000578903 90 ntBASIC5□□□□□ -1.61
SHROOM3Q8TF72 AC010424.2-201ENST00000607594 443 ntBASIC5□□□□□ -1.61
SHROOM3Q8TF72 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SHROOM3Q8TF72 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SHROOM3Q8TF72 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms