Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CCDC65Q8IXS2 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC65Q8IXS2 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
CCDC65Q8IXS2 THAP12P5-201ENST00000405864 2275 ntBASIC5.5□□□□□ -1.53
CCDC65Q8IXS2 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC65Q8IXS2 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC65Q8IXS2 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CCDC65Q8IXS2 RNA5SP428-201ENST00000365129 132 ntBASIC5.5□□□□□ -1.53
CCDC65Q8IXS2 MIR765-201ENST00000390226 114 ntBASIC5.5□□□□□ -1.53
CCDC65Q8IXS2 AL021331.1-201ENST00000402817 582 ntBASIC5.5□□□□□ -1.53
CCDC65Q8IXS2 CTSL3P-202ENST00000412179 788 ntBASIC5.5□□□□□ -1.53
CCDC65Q8IXS2 SMC4P1-201ENST00000414479 527 ntBASIC5.5□□□□□ -1.53
CCDC65Q8IXS2 GJA6P-201ENST00000415117 1042 ntBASIC5.5□□□□□ -1.53
CCDC65Q8IXS2 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC65Q8IXS2 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC65Q8IXS2 RHOT1P3-201ENST00000436571 331 ntBASIC5.5□□□□□ -1.53
CCDC65Q8IXS2 SCAND3P1-201ENST00000439854 1060 ntBASIC5.5□□□□□ -1.53
CCDC65Q8IXS2 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC65Q8IXS2 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC65Q8IXS2 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC65Q8IXS2 RN7SL319P-201ENST00000480656 221 ntBASIC5.5□□□□□ -1.53
CCDC65Q8IXS2 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.5□□□□□ -1.53
CCDC65Q8IXS2 AC013701.1-201ENST00000522657 465 ntBASIC5.5□□□□□ -1.53
CCDC65Q8IXS2 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC65Q8IXS2 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC65Q8IXS2 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.5□□□□□ -1.53
CCDC65Q8IXS2 AC087783.2-201ENST00000605070 562 ntBASIC5.5□□□□□ -1.53
CCDC65Q8IXS2 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.5□□□□□ -1.53
CCDC65Q8IXS2 EIF3FP1-201ENST00000613970 806 ntBASIC5.5□□□□□ -1.53
CCDC65Q8IXS2 AC244517.3-201ENST00000616254 1235 ntBASIC5.5□□□□□ -1.53
CCDC65Q8IXS2 AC037198.3-201ENST00000616754 526 ntBASIC5.5□□□□□ -1.53
CCDC65Q8IXS2 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC65Q8IXS2 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.5□□□□□ -1.53
CCDC65Q8IXS2 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.5□□□□□ -1.53
CCDC65Q8IXS2 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
CCDC65Q8IXS2 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC65Q8IXS2 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC65Q8IXS2 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CCDC65Q8IXS2 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 AL078599.1-201ENST00000402075 293 ntBASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 RNU4-34P-201ENST00000410431 124 ntBASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 BMS1P13-201ENST00000417301 885 ntBASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 AF186996.5-201ENST00000418098 904 ntBASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 OR5M12P-201ENST00000423388 929 ntBASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 AC092162.1-201ENST00000432828 434 ntBASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 AC092647.3-201ENST00000443044 633 ntBASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 AC073850.1-201ENST00000449243 255 ntBASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 RN7SL517P-201ENST00000462240 305 ntBASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 OR2A3P-201ENST00000493774 953 ntBASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 AC093763.2-201ENST00000505334 1223 ntBASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 RN7SKP147-201ENST00000517154 244 ntBASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 AL049830.4-201ENST00000555149 351 ntBASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 AC018552.1-201ENST00000562099 811 ntBASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 AL137072.1-201ENST00000603444 466 ntBASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 AC087821.1-201ENST00000623639 567 ntBASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 AP001642.1-201ENST00000624727 2117 ntBASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 AC007996.1-201ENST00000620414 2821 ntBASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC65Q8IXS2 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 HSPA8P18-201ENST00000439846 1928 ntBASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 AC093162.1-201ENST00000419682 124 ntBASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 BX510359.3-201ENST00000422168 306 ntBASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 AL157385.1-201ENST00000446973 268 ntBASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 RNA5SP103-201ENST00000459503 118 ntBASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 RN7SL97P-201ENST00000486780 299 ntBASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 AC111000.5-201ENST00000506559 1178 ntBASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 ENPP7P9-201ENST00000514456 627 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms