Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 MTHFD2P5-201ENST00000320415 844 ntBASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 SNORA51.8-201ENST00000384234 132 ntBASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 AL021331.1-201ENST00000402817 582 ntBASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 RN7SKP125-201ENST00000410481 302 ntBASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 RPL7P11-201ENST00000437586 658 ntBASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 OTX2P1-201ENST00000450956 354 ntBASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 AL356390.1-201ENST00000455684 397 ntBASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 AC245028.2-201ENST00000458673 253 ntBASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 AC021660.1-201ENST00000465006 554 ntBASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 NPM1P29-201ENST00000483112 803 ntBASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 NDUFB5P1-201ENST00000508134 564 ntBASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 AC006349.1-201ENST00000555526 235 ntBASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 AC233702.9-201ENST00000581528 203 ntBASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 AC073575.2-201ENST00000614212 627 ntBASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 ECM1P2-201ENST00000503354 1577 ntBASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.61□□□□□ -1.67
C9orf40Q8IXQ3 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 AC073136.1-201ENST00000449426 2884 ntBASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 AP001642.1-201ENST00000624727 2117 ntBASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 NAMPTP1-201ENST00000440465 2514 ntBASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 RPS26P13-201ENST00000419030 330 ntBASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 OR2AM1P-201ENST00000422137 422 ntBASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 RCC2P2-201ENST00000422174 918 ntBASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 AC093414.1-201ENST00000434712 514 ntBASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 VN1R54P-201ENST00000435210 1049 ntBASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 PA2G4P6-201ENST00000438325 1197 ntBASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 SUMO2P1-206ENST00000445436 284 ntBASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 HIGD1AP8-201ENST00000453927 274 ntBASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 TPT1P1-201ENST00000458495 518 ntBASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 BTF3P13-201ENST00000513224 490 ntBASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 AC005000.1-201ENST00000536192 288 ntBASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 GCSHP4-201ENST00000538792 439 ntBASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 AC008033.2-201ENST00000542626 177 ntBASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 AC116553.2-201ENST00000564203 463 ntBASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 AC087385.3-201ENST00000620477 187 ntBASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms