Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.61□□□□□ -1.51
VRK3Q8IV63 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.61□□□□□ -1.51
VRK3Q8IV63 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.61□□□□□ -1.51
VRK3Q8IV63 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.61□□□□□ -1.51
VRK3Q8IV63 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.61□□□□□ -1.51
VRK3Q8IV63 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC5.61□□□□□ -1.51
VRK3Q8IV63 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VRK3Q8IV63 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.61□□□□□ -1.51
VRK3Q8IV63 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.61□□□□□ -1.51
VRK3Q8IV63 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.61□□□□□ -1.51
VRK3Q8IV63 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.61□□□□□ -1.51
VRK3Q8IV63 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.61□□□□□ -1.51
VRK3Q8IV63 AL163952.1-202ENST00000569625 600 ntBASIC5.61□□□□□ -1.51
VRK3Q8IV63 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.61□□□□□ -1.51
VRK3Q8IV63 KARSP3-201ENST00000571212 1504 ntBASIC5.61□□□□□ -1.51
VRK3Q8IV63 AL354943.1-201ENST00000572103 781 ntBASIC5.61□□□□□ -1.51
VRK3Q8IV63 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC5.61□□□□□ -1.51
VRK3Q8IV63 MIR4260-201ENST00000583107 67 ntBASIC5.61□□□□□ -1.51
VRK3Q8IV63 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.61□□□□□ -1.51
VRK3Q8IV63 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.61□□□□□ -1.51
VRK3Q8IV63 AC067959.1-201ENST00000604334 379 ntBASIC5.61□□□□□ -1.51
VRK3Q8IV63 AL513477.2-201ENST00000607858 568 ntBASIC5.61□□□□□ -1.51
VRK3Q8IV63 AL138478.1-201ENST00000612252 832 ntBASIC5.61□□□□□ -1.51
VRK3Q8IV63 AC009163.6-201ENST00000612367 342 ntBASIC5.61□□□□□ -1.51
VRK3Q8IV63 RN7SL544P-201ENST00000617232 284 ntBASIC5.61□□□□□ -1.51
VRK3Q8IV63 RN7SL763P-201ENST00000620922 284 ntBASIC5.61□□□□□ -1.51
VRK3Q8IV63 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
VRK3Q8IV63 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.61□□□□□ -1.51
VRK3Q8IV63 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VRK3Q8IV63 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VRK3Q8IV63 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
VRK3Q8IV63 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VRK3Q8IV63 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
VRK3Q8IV63 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VRK3Q8IV63 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VRK3Q8IV63 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
VRK3Q8IV63 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
VRK3Q8IV63 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
VRK3Q8IV63 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.6□□□□□ -1.51
VRK3Q8IV63 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VRK3Q8IV63 AL390237.1-201ENST00000404226 1415 ntBASIC5.6□□□□□ -1.51
VRK3Q8IV63 AC106872.5-201ENST00000508856 1416 ntBASIC5.6□□□□□ -1.51
VRK3Q8IV63 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.6□□□□□ -1.51
VRK3Q8IV63 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.6□□□□□ -1.51
VRK3Q8IV63 AC007382.1-201ENST00000624376 2618 ntBASIC5.6□□□□□ -1.51
VRK3Q8IV63 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
VRK3Q8IV63 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
VRK3Q8IV63 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
VRK3Q8IV63 RNA5SP394-201ENST00000364216 119 ntBASIC5.6□□□□□ -1.51
VRK3Q8IV63 U3.10-201ENST00000364459 214 ntBASIC5.6□□□□□ -1.51
VRK3Q8IV63 RNU4-75P-201ENST00000364621 146 ntBASIC5.6□□□□□ -1.51
VRK3Q8IV63 RNU6-304P-201ENST00000364855 107 ntBASIC5.6□□□□□ -1.51
VRK3Q8IV63 OR13C3-201ENST00000374781 1108 ntBASIC5.6□□□□□ -1.51
VRK3Q8IV63 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
VRK3Q8IV63 RNU6-796P-201ENST00000391086 107 ntBASIC5.6□□□□□ -1.51
VRK3Q8IV63 AL603865.2-201ENST00000401679 213 ntBASIC5.6□□□□□ -1.51
VRK3Q8IV63 HMGB1P20-201ENST00000402555 677 ntBASIC5.6□□□□□ -1.51
VRK3Q8IV63 TATDN1P1-201ENST00000414123 891 ntBASIC5.6□□□□□ -1.51
VRK3Q8IV63 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.6□□□□□ -1.51
VRK3Q8IV63 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC5.6□□□□□ -1.51
VRK3Q8IV63 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.6□□□□□ -1.51
VRK3Q8IV63 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC5.6□□□□□ -1.51
VRK3Q8IV63 MTND4P20-201ENST00000424125 869 ntBASIC5.6□□□□□ -1.51
VRK3Q8IV63 AC002069.1-201ENST00000429649 1159 ntBASIC5.6□□□□□ -1.51
VRK3Q8IV63 AC098826.1-201ENST00000433943 471 ntBASIC5.6□□□□□ -1.51
VRK3Q8IV63 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.6□□□□□ -1.51
VRK3Q8IV63 AC000041.1-201ENST00000439655 175 ntBASIC5.6□□□□□ -1.51
VRK3Q8IV63 RPL34P26-201ENST00000445636 354 ntBASIC5.6□□□□□ -1.51
VRK3Q8IV63 AC009961.3-201ENST00000449832 765 ntBASIC5.6□□□□□ -1.51
VRK3Q8IV63 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.6□□□□□ -1.51
VRK3Q8IV63 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.6□□□□□ -1.51
VRK3Q8IV63 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC5.6□□□□□ -1.51
VRK3Q8IV63 PSMA2P2-201ENST00000504319 686 ntBASIC5.6□□□□□ -1.51
VRK3Q8IV63 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.6□□□□□ -1.51
VRK3Q8IV63 FABP5P12-201ENST00000515543 389 ntBASIC5.6□□□□□ -1.51
VRK3Q8IV63 SNORD46.2-201ENST00000516021 102 ntBASIC5.6□□□□□ -1.51
VRK3Q8IV63 RN7SKP34-201ENST00000516142 244 ntBASIC5.6□□□□□ -1.51
VRK3Q8IV63 MTCO1P49-201ENST00000523429 802 ntBASIC5.6□□□□□ -1.51
VRK3Q8IV63 OR8I1P-201ENST00000529291 931 ntBASIC5.6□□□□□ -1.51
VRK3Q8IV63 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.6□□□□□ -1.51
VRK3Q8IV63 AC022880.1-201ENST00000534017 973 ntBASIC5.6□□□□□ -1.51
VRK3Q8IV63 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.6□□□□□ -1.51
VRK3Q8IV63 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.6□□□□□ -1.51
VRK3Q8IV63 SETP1-201ENST00000556014 845 ntBASIC5.6□□□□□ -1.51
VRK3Q8IV63 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.6□□□□□ -1.51
VRK3Q8IV63 AC106734.1-201ENST00000568646 663 ntBASIC5.6□□□□□ -1.51
VRK3Q8IV63 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC5.6□□□□□ -1.51
VRK3Q8IV63 AC060780.2-201ENST00000589047 198 ntBASIC5.6□□□□□ -1.51
VRK3Q8IV63 AC063977.5-201ENST00000601044 974 ntBASIC5.6□□□□□ -1.51
VRK3Q8IV63 MTCO3P22-201ENST00000603219 784 ntBASIC5.6□□□□□ -1.51
VRK3Q8IV63 QTRT1P1-201ENST00000604344 1078 ntBASIC5.6□□□□□ -1.51
VRK3Q8IV63 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.6□□□□□ -1.51
VRK3Q8IV63 AL021707.7-201ENST00000607991 416 ntBASIC5.6□□□□□ -1.51
VRK3Q8IV63 AC015982.1-201ENST00000608113 465 ntBASIC5.6□□□□□ -1.51
VRK3Q8IV63 AC015540.1-201ENST00000615828 501 ntBASIC5.6□□□□□ -1.51
VRK3Q8IV63 AP003072.4-201ENST00000624580 310 ntBASIC5.6□□□□□ -1.51
VRK3Q8IV63 AC091965.5-201ENST00000624785 342 ntBASIC5.6□□□□□ -1.51
VRK3Q8IV63 AC092159.4-201ENST00000624944 550 ntBASIC5.6□□□□□ -1.51
VRK3Q8IV63 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
VRK3Q8IV63 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms