Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 SNORA48.4-201ENST00000391089 134 ntBASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 RNA5SP241-201ENST00000391326 114 ntBASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 RNU4-74P-201ENST00000411280 161 ntBASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 GNG5P5-201ENST00000420444 220 ntBASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 AC124944.2-201ENST00000429866 1242 ntBASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 GSTM5P1-201ENST00000434751 660 ntBASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 NOP56P2-201ENST00000447491 769 ntBASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 HMGB1P4-201ENST00000455362 567 ntBASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 RNU6-1218P-201ENST00000458990 108 ntBASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 PPIAP21-201ENST00000464473 501 ntBASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 METTL15P1-201ENST00000481421 1045 ntBASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 AC107398.1-201ENST00000486904 505 ntBASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 AC104109.1-201ENST00000498563 436 ntBASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 AC016559.2-201ENST00000510759 359 ntBASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 SCARNA16.4-201ENST00000516956 187 ntBASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 AC103833.1-201ENST00000517442 172 ntBASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 IGKV3D-34-201ENST00000522638 302 ntBASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 YWHABP2-201ENST00000540201 713 ntBASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 RN7SL290P-201ENST00000578661 300 ntBASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 AC007448.1-201ENST00000582714 234 ntBASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 SUGT1P3-202ENST00000604259 383 ntBASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 AL162431.4-201ENST00000604674 411 ntBASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 AC096553.1-201ENST00000605169 829 ntBASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
NHLRC1Q6VVB1 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.78□□□□□ -1.65
NHLRC1Q6VVB1 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.78□□□□□ -1.65
NHLRC1Q6VVB1 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 AL078621.3-201ENST00000623707 2042 ntBASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 RNA5SP319-201ENST00000362768 119 ntBASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 RNU6-452P-201ENST00000384406 107 ntBASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 RNU6-244P-201ENST00000391028 104 ntBASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 AC093719.1-202ENST00000392735 373 ntBASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 RPS27AP11-201ENST00000402798 447 ntBASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 AL512422.1-201ENST00000407033 553 ntBASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 AL390774.1-201ENST00000411924 246 ntBASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 CTSL3P-202ENST00000412179 788 ntBASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 AC016769.2-201ENST00000414815 475 ntBASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 AC073464.3-201ENST00000422564 712 ntBASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 RPS24P8-201ENST00000431490 402 ntBASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 AL353597.2-202ENST00000434901 373 ntBASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 MTND4P15-201ENST00000437913 1033 ntBASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 YWHAZP2-201ENST00000440317 728 ntBASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 RPS26P41-201ENST00000450370 284 ntBASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 OR52E3P-201ENST00000452083 936 ntBASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 DNAJB5P1-201ENST00000454004 806 ntBASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 RPL7P45-201ENST00000455851 743 ntBASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 AC245028.2-201ENST00000458673 253 ntBASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 AC100832.1-201ENST00000471945 383 ntBASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 RPL7P6-201ENST00000480903 738 ntBASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 RN7SL214P-201ENST00000487317 265 ntBASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 RN7SL184P-201ENST00000488308 297 ntBASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 RPL7P51-201ENST00000490532 749 ntBASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 AC093890.1-201ENST00000502554 540 ntBASIC4.77□□□□□ -1.65
NHLRC1Q6VVB1 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms