Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC023421.1-201ENST00000590535 1785 ntBASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
ZNF549Q6P9A3 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 KARSP1-201ENST00000451871 1752 ntBASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 RNA5SP435-201ENST00000364044 108 ntBASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 HSPA8P15-201ENST00000401676 786 ntBASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 TCEA1P2-201ENST00000420496 906 ntBASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 AC005005.2-201ENST00000420779 380 ntBASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 AC013262.1-201ENST00000426710 252 ntBASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 CLUHP1-201ENST00000435012 1190 ntBASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 MTCYBP31-201ENST00000438855 1122 ntBASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 RPSAP39-201ENST00000467439 883 ntBASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 AC020898.1-201ENST00000474167 787 ntBASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 RN7SL205P-201ENST00000490174 284 ntBASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 AC022133.1-201ENST00000490961 571 ntBASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 RNU6-491P-201ENST00000516099 110 ntBASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 GTF2IP11-201ENST00000526931 420 ntBASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 UBTFL9-201ENST00000534504 1148 ntBASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 AC107993.1-201ENST00000591343 684 ntBASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 AC234772.3-201ENST00000602277 528 ntBASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 DUXAP3-201ENST00000603616 594 ntBASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 AC008814.1-201ENST00000603797 406 ntBASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 AC004775.1-201ENST00000607389 753 ntBASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 AC112503.1-201ENST00000608436 391 ntBASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 MIR8084-201ENST00000614105 89 ntBASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 AC025016.1-201ENST00000616746 682 ntBASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 AP002791.1-201ENST00000623291 381 ntBASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 AC112694.2-201ENST00000623697 768 ntBASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 AL355480.1-201ENST00000629041 99 ntBASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 Z95331.1-201ENST00000623075 23112 ntBASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 OR55B1P-203ENST00000641518 2602 ntBASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ZNF549Q6P9A3 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
ZNF549Q6P9A3 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
ZNF549Q6P9A3 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
ZNF549Q6P9A3 AL132656.3-201ENST00000606384 1595 ntBASIC5.21□□□□□ -1.57
ZNF549Q6P9A3 ADAM5-202ENST00000399789 1942 ntBASIC5.21□□□□□ -1.57
ZNF549Q6P9A3 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 OR9K1P-201ENST00000326513 941 ntBASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 RNU5E-10P-201ENST00000363506 118 ntBASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 RN7SKP153-201ENST00000365026 316 ntBASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 RNY3P9-201ENST00000384727 106 ntBASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 RNA5SP178-201ENST00000410380 128 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms