Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
RFX4Q33E94 MIR600-201ENST00000385007 98 ntBASIC4.6□□□□□ -1.67
RFX4Q33E94 SNORA17A-201ENST00000391185 133 ntBASIC4.6□□□□□ -1.67
RFX4Q33E94 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.6□□□□□ -1.67
RFX4Q33E94 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.6□□□□□ -1.67
RFX4Q33E94 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.6□□□□□ -1.67
RFX4Q33E94 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.6□□□□□ -1.67
RFX4Q33E94 EI24P4-201ENST00000423683 1078 ntBASIC4.6□□□□□ -1.67
RFX4Q33E94 AL355994.1-201ENST00000424379 260 ntBASIC4.6□□□□□ -1.67
RFX4Q33E94 RPS29P9-201ENST00000440360 171 ntBASIC4.6□□□□□ -1.67
RFX4Q33E94 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.6□□□□□ -1.67
RFX4Q33E94 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RFX4Q33E94 AC144530.1-201ENST00000452862 555 ntBASIC4.6□□□□□ -1.67
RFX4Q33E94 AC005008.1-201ENST00000456151 612 ntBASIC4.6□□□□□ -1.67
RFX4Q33E94 Z92846.1-201ENST00000456203 268 ntBASIC4.6□□□□□ -1.67
RFX4Q33E94 SIAH1P1-201ENST00000479411 923 ntBASIC4.6□□□□□ -1.67
RFX4Q33E94 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.6□□□□□ -1.67
RFX4Q33E94 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.6□□□□□ -1.67
RFX4Q33E94 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.6□□□□□ -1.67
RFX4Q33E94 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.6□□□□□ -1.67
RFX4Q33E94 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.6□□□□□ -1.67
RFX4Q33E94 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.6□□□□□ -1.67
RFX4Q33E94 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
RFX4Q33E94 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
RFX4Q33E94 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
RFX4Q33E94 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
RFX4Q33E94 AC079075.1-201ENST00000559543 878 ntBASIC4.6□□□□□ -1.67
RFX4Q33E94 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.6□□□□□ -1.67
RFX4Q33E94 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.6□□□□□ -1.67
RFX4Q33E94 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.6□□□□□ -1.67
RFX4Q33E94 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.6□□□□□ -1.67
RFX4Q33E94 AC069307.1-201ENST00000602820 447 ntBASIC4.6□□□□□ -1.67
RFX4Q33E94 AC104687.2-201ENST00000604442 342 ntBASIC4.6□□□□□ -1.67
RFX4Q33E94 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.6□□□□□ -1.67
RFX4Q33E94 uc_338.18-201ENST00000615451 175 ntBASIC4.6□□□□□ -1.67
RFX4Q33E94 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.6□□□□□ -1.67
RFX4Q33E94 SNORA17.5-201ENST00000630429 132 ntBASIC4.6□□□□□ -1.67
RFX4Q33E94 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
RFX4Q33E94 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.6□□□□□ -1.67
RFX4Q33E94 BRAFP1-201ENST00000445336 2703 ntBASIC4.6□□□□□ -1.67
RFX4Q33E94 SYT14P1-202ENST00000600441 1448 ntBASIC4.6□□□□□ -1.67
RFX4Q33E94 AC120338.1-201ENST00000625074 1541 ntBASIC4.6□□□□□ -1.67
RFX4Q33E94 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RFX4Q33E94 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
RFX4Q33E94 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RFX4Q33E94 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
RFX4Q33E94 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RFX4Q33E94 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
RFX4Q33E94 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RFX4Q33E94 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RFX4Q33E94 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RFX4Q33E94 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RFX4Q33E94 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.59□□□□□ -1.67
RFX4Q33E94 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
RFX4Q33E94 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
RFX4Q33E94 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.59□□□□□ -1.67
RFX4Q33E94 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RFX4Q33E94 RN7SKP15-201ENST00000364742 309 ntBASIC4.59□□□□□ -1.67
RFX4Q33E94 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.59□□□□□ -1.67
RFX4Q33E94 SNORA67-201ENST00000384423 137 ntBASIC4.59□□□□□ -1.67
RFX4Q33E94 SNORA66-201ENST00000384792 133 ntBASIC4.59□□□□□ -1.67
RFX4Q33E94 RNA5SP372-201ENST00000390836 115 ntBASIC4.59□□□□□ -1.67
RFX4Q33E94 AC009804.1-201ENST00000400949 179 ntBASIC4.59□□□□□ -1.67
RFX4Q33E94 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
RFX4Q33E94 SEPT7P8-201ENST00000413308 775 ntBASIC4.59□□□□□ -1.67
RFX4Q33E94 E2F6P2-201ENST00000420708 748 ntBASIC4.59□□□□□ -1.67
RFX4Q33E94 NFYAP1-201ENST00000431953 972 ntBASIC4.59□□□□□ -1.67
RFX4Q33E94 AC073052.1-201ENST00000440417 714 ntBASIC4.59□□□□□ -1.67
RFX4Q33E94 RPS26P41-201ENST00000450370 284 ntBASIC4.59□□□□□ -1.67
RFX4Q33E94 KARSP1-201ENST00000451871 1752 ntBASIC4.59□□□□□ -1.67
RFX4Q33E94 HMGB1P4-201ENST00000455362 567 ntBASIC4.59□□□□□ -1.67
RFX4Q33E94 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.59□□□□□ -1.67
RFX4Q33E94 AC235565.1-201ENST00000456962 1325 ntBASIC4.59□□□□□ -1.67
RFX4Q33E94 RPSAP39-201ENST00000467439 883 ntBASIC4.59□□□□□ -1.67
RFX4Q33E94 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.59□□□□□ -1.67
RFX4Q33E94 RN7SL717P-201ENST00000478343 297 ntBASIC4.59□□□□□ -1.67
RFX4Q33E94 AC108751.5-201ENST00000492880 1336 ntBASIC4.59□□□□□ -1.67
RFX4Q33E94 AC015864.1-201ENST00000496512 544 ntBASIC4.59□□□□□ -1.67
RFX4Q33E94 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.59□□□□□ -1.67
RFX4Q33E94 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.59□□□□□ -1.67
RFX4Q33E94 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.59□□□□□ -1.67
RFX4Q33E94 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.59□□□□□ -1.67
RFX4Q33E94 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RFX4Q33E94 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RFX4Q33E94 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.59□□□□□ -1.67
RFX4Q33E94 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.59□□□□□ -1.67
RFX4Q33E94 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.59□□□□□ -1.67
RFX4Q33E94 AC084759.1-201ENST00000561168 290 ntBASIC4.59□□□□□ -1.67
RFX4Q33E94 ATP5J2P6-201ENST00000565203 266 ntBASIC4.59□□□□□ -1.67
RFX4Q33E94 AC009643.2-201ENST00000603543 1448 ntBASIC4.59□□□□□ -1.67
RFX4Q33E94 AL359513.1-201ENST00000614364 557 ntBASIC4.59□□□□□ -1.67
RFX4Q33E94 AC005840.5-201ENST00000619166 599 ntBASIC4.59□□□□□ -1.67
RFX4Q33E94 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.59□□□□□ -1.67
RFX4Q33E94 AC004232.3-201ENST00000622977 525 ntBASIC4.59□□□□□ -1.67
RFX4Q33E94 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.59□□□□□ -1.67
RFX4Q33E94 AC027290.2-201ENST00000623210 18662 ntBASIC4.59□□□□□ -1.67
RFX4Q33E94 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
RFX4Q33E94 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
RFX4Q33E94 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
RFX4Q33E94 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms