Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
PDS5AQ29RF7 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDS5AQ29RF7 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDS5AQ29RF7 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDS5AQ29RF7 AP005435.3-201ENST00000531260 3198 ntBASIC5.92□□□□□ -1.46
PDS5AQ29RF7 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDS5AQ29RF7 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDS5AQ29RF7 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDS5AQ29RF7 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDS5AQ29RF7 OR5T3-201ENST00000303059 1023 ntBASIC5.92□□□□□ -1.46
PDS5AQ29RF7 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDS5AQ29RF7 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDS5AQ29RF7 SNORA56-201ENST00000383966 129 ntBASIC5.92□□□□□ -1.46
PDS5AQ29RF7 AC019050.1-201ENST00000418508 492 ntBASIC5.92□□□□□ -1.46
PDS5AQ29RF7 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.92□□□□□ -1.46
PDS5AQ29RF7 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.92□□□□□ -1.46
PDS5AQ29RF7 RPS29P33-201ENST00000456717 146 ntBASIC5.92□□□□□ -1.46
PDS5AQ29RF7 AP001960.1-201ENST00000506494 658 ntBASIC5.92□□□□□ -1.46
PDS5AQ29RF7 AC113398.2-201ENST00000507630 558 ntBASIC5.92□□□□□ -1.46
PDS5AQ29RF7 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.92□□□□□ -1.46
PDS5AQ29RF7 AP001284.1-201ENST00000528393 2118 ntBASIC5.92□□□□□ -1.46
PDS5AQ29RF7 AL359219.2-201ENST00000555184 348 ntBASIC5.92□□□□□ -1.46
PDS5AQ29RF7 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.92□□□□□ -1.46
PDS5AQ29RF7 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.92□□□□□ -1.46
PDS5AQ29RF7 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.92□□□□□ -1.46
PDS5AQ29RF7 AP000919.1-201ENST00000582850 985 ntBASIC5.92□□□□□ -1.46
PDS5AQ29RF7 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.92□□□□□ -1.46
PDS5AQ29RF7 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.92□□□□□ -1.46
PDS5AQ29RF7 AC010503.3-201ENST00000594355 540 ntBASIC5.92□□□□□ -1.46
PDS5AQ29RF7 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDS5AQ29RF7 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.92□□□□□ -1.46
PDS5AQ29RF7 AC073592.7-201ENST00000623659 507 ntBASIC5.92□□□□□ -1.46
PDS5AQ29RF7 FRG1EP-201ENST00000634469 770 ntBASIC5.92□□□□□ -1.46
PDS5AQ29RF7 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDS5AQ29RF7 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDS5AQ29RF7 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDS5AQ29RF7 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
PDS5AQ29RF7 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PDS5AQ29RF7 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
PDS5AQ29RF7 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDS5AQ29RF7 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
PDS5AQ29RF7 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.91□□□□□ -1.46
PDS5AQ29RF7 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.91□□□□□ -1.46
PDS5AQ29RF7 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PDS5AQ29RF7 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDS5AQ29RF7 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.91□□□□□ -1.46
PDS5AQ29RF7 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDS5AQ29RF7 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.91□□□□□ -1.46
PDS5AQ29RF7 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
PDS5AQ29RF7 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.91□□□□□ -1.46
PDS5AQ29RF7 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDS5AQ29RF7 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
PDS5AQ29RF7 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
PDS5AQ29RF7 RNU2-50P-201ENST00000410494 143 ntBASIC5.91□□□□□ -1.46
PDS5AQ29RF7 RN7SKP216-201ENST00000411050 312 ntBASIC5.91□□□□□ -1.46
PDS5AQ29RF7 RSU1P3-201ENST00000412878 835 ntBASIC5.91□□□□□ -1.46
PDS5AQ29RF7 AC092570.3-201ENST00000420113 693 ntBASIC5.91□□□□□ -1.46
PDS5AQ29RF7 AL645608.4-201ENST00000423619 154 ntBASIC5.91□□□□□ -1.46
PDS5AQ29RF7 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.91□□□□□ -1.46
PDS5AQ29RF7 AC005154.2-201ENST00000438110 379 ntBASIC5.91□□□□□ -1.46
PDS5AQ29RF7 AC234781.3-201ENST00000452540 973 ntBASIC5.91□□□□□ -1.46
PDS5AQ29RF7 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDS5AQ29RF7 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.91□□□□□ -1.46
PDS5AQ29RF7 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.91□□□□□ -1.46
PDS5AQ29RF7 AP001880.2-201ENST00000538233 448 ntBASIC5.91□□□□□ -1.46
PDS5AQ29RF7 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PDS5AQ29RF7 TMF1P1-201ENST00000576058 373 ntBASIC5.91□□□□□ -1.46
PDS5AQ29RF7 RN7SL802P-201ENST00000577858 299 ntBASIC5.91□□□□□ -1.46
PDS5AQ29RF7 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.91□□□□□ -1.46
PDS5AQ29RF7 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.91□□□□□ -1.46
PDS5AQ29RF7 AC009303.3-201ENST00000591103 736 ntBASIC5.91□□□□□ -1.46
PDS5AQ29RF7 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.91□□□□□ -1.46
PDS5AQ29RF7 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.91□□□□□ -1.46
PDS5AQ29RF7 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.91□□□□□ -1.46
PDS5AQ29RF7 AC104820.1-201ENST00000624183 307 ntBASIC5.91□□□□□ -1.46
PDS5AQ29RF7 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.91□□□□□ -1.46
PDS5AQ29RF7 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
PDS5AQ29RF7 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.91□□□□□ -1.46
PDS5AQ29RF7 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDS5AQ29RF7 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDS5AQ29RF7 ZFRP1-201ENST00000457579 2970 ntBASIC5.91□□□□□ -1.46
PDS5AQ29RF7 AC068446.1-201ENST00000556425 1549 ntBASIC5.91□□□□□ -1.46
PDS5AQ29RF7 TET1P1-201ENST00000426627 2301 ntBASIC5.9□□□□□ -1.46
PDS5AQ29RF7 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.46
PDS5AQ29RF7 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PDS5AQ29RF7 SCARNA15-201ENST00000607520 4325 ntBASIC5.9□□□□□ -1.46
PDS5AQ29RF7 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PDS5AQ29RF7 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.46
PDS5AQ29RF7 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PDS5AQ29RF7 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.9□□□□□ -1.46
PDS5AQ29RF7 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
PDS5AQ29RF7 AC013442.1-201ENST00000397347 228 ntBASIC5.9□□□□□ -1.47
PDS5AQ29RF7 RPL21P67-201ENST00000402896 478 ntBASIC5.9□□□□□ -1.47
PDS5AQ29RF7 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.9□□□□□ -1.47
PDS5AQ29RF7 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.9□□□□□ -1.47
PDS5AQ29RF7 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.9□□□□□ -1.47
PDS5AQ29RF7 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.9□□□□□ -1.47
PDS5AQ29RF7 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PDS5AQ29RF7 MTND2P3-201ENST00000452458 470 ntBASIC5.9□□□□□ -1.47
PDS5AQ29RF7 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.9□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms