Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AL360219.1-201ENST00000610230 366 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 AC127024.6-201ENST00000621598 424 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 AC129915.3-201ENST00000634128 948 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 ATE1-AS1-202ENST00000636460 506 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 MIR3974-201ENST00000637126 96 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 OR7E91P-202ENST00000642062 1198 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
NKX6-1P78426 Z95114.1-201ENST00000624264 14574 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NKX6-1P78426 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
NKX6-1P78426 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.47□□□□□ -1.53
NKX6-1P78426 DDX18P5-201ENST00000534547 1306 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
NKX6-1P78426 ECM1P2-201ENST00000503354 1577 ntBASIC5.46□□□□□ -1.53
NKX6-1P78426 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
NKX6-1P78426 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
NKX6-1P78426 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.46□□□□□ -1.53
NKX6-1P78426 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
NKX6-1P78426 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.53
NKX6-1P78426 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
NKX6-1P78426 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
NKX6-1P78426 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
NKX6-1P78426 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
NKX6-1P78426 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
NKX6-1P78426 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.46□□□□□ -1.54
NKX6-1P78426 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.46□□□□□ -1.54
NKX6-1P78426 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
NKX6-1P78426 AC025263.3-201ENST00000622965 1396 ntBASIC5.46□□□□□ -1.54
NKX6-1P78426 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NKX6-1P78426 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NKX6-1P78426 HMGB1P5-201ENST00000255320 642 ntBASIC5.46□□□□□ -1.54
NKX6-1P78426 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
NKX6-1P78426 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.46□□□□□ -1.54
NKX6-1P78426 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.46□□□□□ -1.54
NKX6-1P78426 SUGT1P2-201ENST00000379452 992 ntBASIC5.46□□□□□ -1.54
NKX6-1P78426 SNORA51.9-201ENST00000384295 124 ntBASIC5.46□□□□□ -1.54
NKX6-1P78426 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
NKX6-1P78426 RAP1BP1-201ENST00000412709 553 ntBASIC5.46□□□□□ -1.54
NKX6-1P78426 AC007435.1-201ENST00000421086 415 ntBASIC5.46□□□□□ -1.54
NKX6-1P78426 RPL7P53-201ENST00000421245 739 ntBASIC5.46□□□□□ -1.54
NKX6-1P78426 RPL21P43-201ENST00000425440 472 ntBASIC5.46□□□□□ -1.54
NKX6-1P78426 AC073069.1-201ENST00000428657 441 ntBASIC5.46□□□□□ -1.54
NKX6-1P78426 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NKX6-1P78426 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.46□□□□□ -1.54
NKX6-1P78426 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.46□□□□□ -1.54
NKX6-1P78426 AC073143.1-201ENST00000436316 395 ntBASIC5.46□□□□□ -1.54
NKX6-1P78426 USP9YP22-201ENST00000438971 294 ntBASIC5.46□□□□□ -1.54
NKX6-1P78426 VN1R38P-201ENST00000450265 887 ntBASIC5.46□□□□□ -1.54
NKX6-1P78426 AL133217.1-201ENST00000450980 425 ntBASIC5.46□□□□□ -1.54
NKX6-1P78426 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NKX6-1P78426 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.46□□□□□ -1.54
NKX6-1P78426 ACA64.1-201ENST00000459171 127 ntBASIC5.46□□□□□ -1.54
NKX6-1P78426 AC010468.1-201ENST00000461022 817 ntBASIC5.46□□□□□ -1.54
NKX6-1P78426 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.46□□□□□ -1.54
NKX6-1P78426 RPL23AP71-201ENST00000470966 469 ntBASIC5.46□□□□□ -1.54
NKX6-1P78426 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.46□□□□□ -1.54
NKX6-1P78426 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC5.46□□□□□ -1.54
NKX6-1P78426 OR7E99P-201ENST00000505750 922 ntBASIC5.46□□□□□ -1.54
NKX6-1P78426 OR4D12P-201ENST00000509361 911 ntBASIC5.46□□□□□ -1.54
NKX6-1P78426 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.46□□□□□ -1.54
NKX6-1P78426 AC010285.3-201ENST00000511668 676 ntBASIC5.46□□□□□ -1.54
NKX6-1P78426 AC060775.1-201ENST00000518241 520 ntBASIC5.46□□□□□ -1.54
NKX6-1P78426 IGKV2-36-201ENST00000519999 223 ntBASIC5.46□□□□□ -1.54
NKX6-1P78426 AC138832.1-201ENST00000522871 556 ntBASIC5.46□□□□□ -1.54
NKX6-1P78426 AC036111.2-201ENST00000533247 901 ntBASIC5.46□□□□□ -1.54
NKX6-1P78426 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
NKX6-1P78426 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.46□□□□□ -1.54
NKX6-1P78426 AC051619.2-201ENST00000559063 397 ntBASIC5.46□□□□□ -1.54
NKX6-1P78426 AC109446.2-201ENST00000567872 497 ntBASIC5.46□□□□□ -1.54
NKX6-1P78426 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.46□□□□□ -1.54
NKX6-1P78426 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NKX6-1P78426 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.46□□□□□ -1.54
NKX6-1P78426 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.46□□□□□ -1.54
NKX6-1P78426 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.46□□□□□ -1.54
NKX6-1P78426 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.46□□□□□ -1.54
NKX6-1P78426 BNIP3P26-201ENST00000600827 554 ntBASIC5.46□□□□□ -1.54
NKX6-1P78426 AC005252.1-201ENST00000604518 1063 ntBASIC5.46□□□□□ -1.54
NKX6-1P78426 AL008723.3-201ENST00000608926 449 ntBASIC5.46□□□□□ -1.54
NKX6-1P78426 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.46□□□□□ -1.54
NKX6-1P78426 VIS1.1-201ENST00000610517 203 ntBASIC5.46□□□□□ -1.54
NKX6-1P78426 AC090246.1-201ENST00000616499 426 ntBASIC5.46□□□□□ -1.54
NKX6-1P78426 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
NKX6-1P78426 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.46□□□□□ -1.54
NKX6-1P78426 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
NKX6-1P78426 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
NKX6-1P78426 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NKX6-1P78426 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NKX6-1P78426 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
NKX6-1P78426 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.46□□□□□ -1.54
NKX6-1P78426 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
NKX6-1P78426 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NKX6-1P78426 AC079753.1-201ENST00000623243 3868 ntBASIC5.46□□□□□ -1.54
NKX6-1P78426 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
NKX6-1P78426 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.45□□□□□ -1.54
NKX6-1P78426 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NKX6-1P78426 AL731556.1-201ENST00000394628 3711 ntBASIC5.45□□□□□ -1.54
NKX6-1P78426 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NKX6-1P78426 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NKX6-1P78426 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NKX6-1P78426 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 153.4 ms