Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.86□□□□□ -1.63
SEC61A1P61619 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.86□□□□□ -1.63
SEC61A1P61619 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.86□□□□□ -1.63
SEC61A1P61619 FABP5P3-201ENST00000437960 408 ntBASIC4.86□□□□□ -1.63
SEC61A1P61619 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.86□□□□□ -1.63
SEC61A1P61619 AC015983.1-201ENST00000441577 373 ntBASIC4.86□□□□□ -1.63
SEC61A1P61619 AC012512.1-201ENST00000446594 718 ntBASIC4.86□□□□□ -1.63
SEC61A1P61619 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.86□□□□□ -1.63
SEC61A1P61619 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.86□□□□□ -1.63
SEC61A1P61619 AC093166.2-201ENST00000455969 1017 ntBASIC4.86□□□□□ -1.63
SEC61A1P61619 AC018638.3-201ENST00000461273 132 ntBASIC4.86□□□□□ -1.63
SEC61A1P61619 AC020898.1-201ENST00000474167 787 ntBASIC4.86□□□□□ -1.63
SEC61A1P61619 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.86□□□□□ -1.63
SEC61A1P61619 AC005351.1-201ENST00000511152 786 ntBASIC4.86□□□□□ -1.63
SEC61A1P61619 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.86□□□□□ -1.63
SEC61A1P61619 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.86□□□□□ -1.63
SEC61A1P61619 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.86□□□□□ -1.63
SEC61A1P61619 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.86□□□□□ -1.63
SEC61A1P61619 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SEC61A1P61619 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.86□□□□□ -1.63
SEC61A1P61619 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.86□□□□□ -1.63
SEC61A1P61619 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.86□□□□□ -1.63
SEC61A1P61619 AC091078.2-201ENST00000557145 559 ntBASIC4.86□□□□□ -1.63
SEC61A1P61619 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC4.86□□□□□ -1.63
SEC61A1P61619 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SEC61A1P61619 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.86□□□□□ -1.63
SEC61A1P61619 RN7SL753P-201ENST00000581238 290 ntBASIC4.86□□□□□ -1.63
SEC61A1P61619 AC099785.1-201ENST00000605697 437 ntBASIC4.86□□□□□ -1.63
SEC61A1P61619 AC145423.1-201ENST00000605712 336 ntBASIC4.86□□□□□ -1.63
SEC61A1P61619 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
SEC61A1P61619 RN7SL787P-201ENST00000613000 284 ntBASIC4.86□□□□□ -1.63
SEC61A1P61619 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.86□□□□□ -1.63
SEC61A1P61619 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.86□□□□□ -1.63
SEC61A1P61619 AP002791.1-201ENST00000623291 381 ntBASIC4.86□□□□□ -1.63
SEC61A1P61619 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.86□□□□□ -1.63
SEC61A1P61619 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC4.86□□□□□ -1.63
SEC61A1P61619 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.86□□□□□ -1.63
SEC61A1P61619 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SEC61A1P61619 OFD1P8Y-201ENST00000449148 1433 ntBASIC4.86□□□□□ -1.63
SEC61A1P61619 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SEC61A1P61619 MFSD8-220ENST00000641243 1422 ntBASIC4.86□□□□□ -1.63
SEC61A1P61619 MFSD8-239ENST00000641590 2479 ntBASIC4.86□□□□□ -1.63
SEC61A1P61619 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SEC61A1P61619 AC012321.1-201ENST00000561622 1588 ntBASIC4.86□□□□□ -1.63
SEC61A1P61619 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SEC61A1P61619 AC104964.3-201ENST00000606115 2860 ntBASIC4.86□□□□□ -1.63
SEC61A1P61619 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.86□□□□□ -1.63
SEC61A1P61619 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.86□□□□□ -1.63
SEC61A1P61619 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SEC61A1P61619 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.86□□□□□ -1.63
SEC61A1P61619 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.86□□□□□ -1.63
SEC61A1P61619 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SEC61A1P61619 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SEC61A1P61619 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SEC61A1P61619 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SEC61A1P61619 AC092681.1-201ENST00000297369 291 ntBASIC4.85□□□□□ -1.63
SEC61A1P61619 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SEC61A1P61619 RNA5SP242-201ENST00000364171 118 ntBASIC4.85□□□□□ -1.63
SEC61A1P61619 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.85□□□□□ -1.63
SEC61A1P61619 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.85□□□□□ -1.63
SEC61A1P61619 RNU6-1005P-201ENST00000384519 107 ntBASIC4.85□□□□□ -1.63
SEC61A1P61619 GAPDHP15-201ENST00000398586 975 ntBASIC4.85□□□□□ -1.63
SEC61A1P61619 ZNF602P-201ENST00000405929 924 ntBASIC4.85□□□□□ -1.63
SEC61A1P61619 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SEC61A1P61619 RNA5SP178-201ENST00000410380 128 ntBASIC4.85□□□□□ -1.63
SEC61A1P61619 AC096921.1-201ENST00000411661 375 ntBASIC4.85□□□□□ -1.63
SEC61A1P61619 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.85□□□□□ -1.63
SEC61A1P61619 NPM1P40-201ENST00000412758 733 ntBASIC4.85□□□□□ -1.63
SEC61A1P61619 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.85□□□□□ -1.63
SEC61A1P61619 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.85□□□□□ -1.63
SEC61A1P61619 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SEC61A1P61619 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.85□□□□□ -1.63
SEC61A1P61619 CHEK2P5-201ENST00000423877 246 ntBASIC4.85□□□□□ -1.63
SEC61A1P61619 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.85□□□□□ -1.63
SEC61A1P61619 HMGB3P24-201ENST00000433260 622 ntBASIC4.85□□□□□ -1.63
SEC61A1P61619 AL035246.1-201ENST00000433554 1255 ntBASIC4.85□□□□□ -1.63
SEC61A1P61619 MTCO1P53-201ENST00000441633 699 ntBASIC4.85□□□□□ -1.63
SEC61A1P61619 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.85□□□□□ -1.63
SEC61A1P61619 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.85□□□□□ -1.63
SEC61A1P61619 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SEC61A1P61619 YWHAEP1-201ENST00000453697 763 ntBASIC4.85□□□□□ -1.63
SEC61A1P61619 RPS23P6-201ENST00000466136 431 ntBASIC4.85□□□□□ -1.63
SEC61A1P61619 CBX1P5-201ENST00000475330 559 ntBASIC4.85□□□□□ -1.63
SEC61A1P61619 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.85□□□□□ -1.63
SEC61A1P61619 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SEC61A1P61619 RN7SL273P-201ENST00000481561 299 ntBASIC4.85□□□□□ -1.63
SEC61A1P61619 MTCO3P35-201ENST00000485582 781 ntBASIC4.85□□□□□ -1.63
SEC61A1P61619 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.85□□□□□ -1.63
SEC61A1P61619 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.85□□□□□ -1.63
SEC61A1P61619 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SEC61A1P61619 AC105384.2-201ENST00000508433 640 ntBASIC4.85□□□□□ -1.63
SEC61A1P61619 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.85□□□□□ -1.63
SEC61A1P61619 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.85□□□□□ -1.63
SEC61A1P61619 BTG4P1-201ENST00000510421 183 ntBASIC4.85□□□□□ -1.63
SEC61A1P61619 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC4.85□□□□□ -1.63
SEC61A1P61619 AP001207.2-201ENST00000519490 539 ntBASIC4.85□□□□□ -1.63
SEC61A1P61619 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.85□□□□□ -1.63
SEC61A1P61619 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.85□□□□□ -1.63
SEC61A1P61619 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC4.85□□□□□ -1.63
SEC61A1P61619 NIFKP6-201ENST00000598115 845 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms