Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CKS1BP61024 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CKS1BP61024 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC3.59□□□□□ -1.84
CKS1BP61024 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CKS1BP61024 AC053481.2-202ENST00000582394 1500 ntBASIC3.59□□□□□ -1.84
CKS1BP61024 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CKS1BP61024 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CKS1BP61024 AC009229.4-201ENST00000623854 1947 ntBASIC3.58□□□□□ -1.84
CKS1BP61024 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.58□□□□□ -1.84
CKS1BP61024 MRE11P1-201ENST00000464884 2127 ntBASIC3.58□□□□□ -1.84
CKS1BP61024 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CKS1BP61024 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.58□□□□□ -1.84
CKS1BP61024 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CKS1BP61024 MIR375-201ENST00000362103 64 ntBASIC3.58□□□□□ -1.84
CKS1BP61024 RNA5SP372-201ENST00000390836 115 ntBASIC3.58□□□□□ -1.84
CKS1BP61024 MIR1203-201ENST00000408812 85 ntBASIC3.58□□□□□ -1.84
CKS1BP61024 RNU6-603P-201ENST00000411403 107 ntBASIC3.58□□□□□ -1.84
CKS1BP61024 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.58□□□□□ -1.84
CKS1BP61024 RPL6P29-201ENST00000414863 865 ntBASIC3.58□□□□□ -1.84
CKS1BP61024 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CKS1BP61024 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC3.58□□□□□ -1.84
CKS1BP61024 AC124944.2-201ENST00000429866 1242 ntBASIC3.58□□□□□ -1.84
CKS1BP61024 FABP7P2-201ENST00000429946 379 ntBASIC3.58□□□□□ -1.84
CKS1BP61024 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.58□□□□□ -1.84
CKS1BP61024 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC3.58□□□□□ -1.84
CKS1BP61024 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC3.58□□□□□ -1.84
CKS1BP61024 RPS11P7-201ENST00000442125 465 ntBASIC3.58□□□□□ -1.84
CKS1BP61024 AL672138.1-201ENST00000450604 1015 ntBASIC3.58□□□□□ -1.84
CKS1BP61024 AC118758.1-202ENST00000454719 225 ntBASIC3.58□□□□□ -1.84
CKS1BP61024 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC3.58□□□□□ -1.84
CKS1BP61024 RN7SL517P-201ENST00000462240 305 ntBASIC3.58□□□□□ -1.84
CKS1BP61024 AC006967.1-201ENST00000467608 589 ntBASIC3.58□□□□□ -1.84
CKS1BP61024 AC108751.2-201ENST00000469993 231 ntBASIC3.58□□□□□ -1.84
CKS1BP61024 AC106872.2-201ENST00000494303 480 ntBASIC3.58□□□□□ -1.84
CKS1BP61024 RN7SL612P-201ENST00000497704 295 ntBASIC3.58□□□□□ -1.84
CKS1BP61024 NIFKP7-201ENST00000503365 834 ntBASIC3.58□□□□□ -1.84
CKS1BP61024 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC3.58□□□□□ -1.84
CKS1BP61024 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC3.58□□□□□ -1.84
CKS1BP61024 AC006499.4-201ENST00000510947 694 ntBASIC3.58□□□□□ -1.84
CKS1BP61024 AC074087.1-201ENST00000512059 724 ntBASIC3.58□□□□□ -1.84
CKS1BP61024 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC3.58□□□□□ -1.84
CKS1BP61024 SNORD116-26-201ENST00000516006 96 ntBASIC3.58□□□□□ -1.84
CKS1BP61024 RNU6-615P-201ENST00000516065 106 ntBASIC3.58□□□□□ -1.84
CKS1BP61024 RNA5SP438-201ENST00000516561 112 ntBASIC3.58□□□□□ -1.84
CKS1BP61024 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC3.58□□□□□ -1.84
CKS1BP61024 OR5AZ1P-201ENST00000527448 943 ntBASIC3.58□□□□□ -1.84
CKS1BP61024 AC027369.2-201ENST00000528030 440 ntBASIC3.58□□□□□ -1.84
CKS1BP61024 AC092851.1-201ENST00000535964 478 ntBASIC3.58□□□□□ -1.84
CKS1BP61024 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC3.58□□□□□ -1.84
CKS1BP61024 AC079600.1-201ENST00000550326 297 ntBASIC3.58□□□□□ -1.84
CKS1BP61024 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC3.58□□□□□ -1.84
CKS1BP61024 MRPS21P7-201ENST00000566937 238 ntBASIC3.58□□□□□ -1.84
CKS1BP61024 AC005341.1-201ENST00000571086 708 ntBASIC3.58□□□□□ -1.84
CKS1BP61024 RN7SL356P-201ENST00000582228 248 ntBASIC3.58□□□□□ -1.84
CKS1BP61024 OR1AB1P-201ENST00000585564 761 ntBASIC3.58□□□□□ -1.84
CKS1BP61024 HMGB2P1-201ENST00000591146 634 ntBASIC3.58□□□□□ -1.84
CKS1BP61024 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC3.58□□□□□ -1.84
CKS1BP61024 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC3.58□□□□□ -1.84
CKS1BP61024 PPATP2-201ENST00000605635 508 ntBASIC3.58□□□□□ -1.84
CKS1BP61024 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC3.58□□□□□ -1.84
CKS1BP61024 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CKS1BP61024 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC3.58□□□□□ -1.84
CKS1BP61024 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC3.58□□□□□ -1.84
CKS1BP61024 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC3.58□□□□□ -1.84
CKS1BP61024 AC111152.1-202ENST00000635848 339 ntBASIC3.58□□□□□ -1.84
CKS1BP61024 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC3.58□□□□□ -1.84
CKS1BP61024 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.58□□□□□ -1.84
CKS1BP61024 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
CKS1BP61024 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CKS1BP61024 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC3.58□□□□□ -1.84
CKS1BP61024 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
CKS1BP61024 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
CKS1BP61024 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.58□□□□□ -1.84
CKS1BP61024 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CKS1BP61024 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC3.58□□□□□ -1.84
CKS1BP61024 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC3.57□□□□□ -1.84
CKS1BP61024 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
CKS1BP61024 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CKS1BP61024 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CKS1BP61024 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CKS1BP61024 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CKS1BP61024 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CKS1BP61024 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CKS1BP61024 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CKS1BP61024 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CKS1BP61024 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC3.57□□□□□ -1.84
CKS1BP61024 AC245060.4-201ENST00000413293 1121 ntBASIC3.57□□□□□ -1.84
CKS1BP61024 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC3.57□□□□□ -1.84
CKS1BP61024 VN1R37P-201ENST00000419096 748 ntBASIC3.57□□□□□ -1.84
CKS1BP61024 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.57□□□□□ -1.84
CKS1BP61024 RPL7P53-201ENST00000421245 739 ntBASIC3.57□□□□□ -1.84
CKS1BP61024 AC093698.1-201ENST00000423843 571 ntBASIC3.57□□□□□ -1.84
CKS1BP61024 FTH1P6-201ENST00000430768 320 ntBASIC3.57□□□□□ -1.84
CKS1BP61024 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC3.57□□□□□ -1.84
CKS1BP61024 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC3.57□□□□□ -1.84
CKS1BP61024 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC3.57□□□□□ -1.84
CKS1BP61024 MTND2P2-201ENST00000434633 945 ntBASIC3.57□□□□□ -1.84
CKS1BP61024 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC3.57□□□□□ -1.84
CKS1BP61024 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CKS1BP61024 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms