Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AP001804.2-201ENST00000533932 910 ntBASIC4.86□□□□□ -1.63
CDH11P55287 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.86□□□□□ -1.63
CDH11P55287 NOP56P3-201ENST00000549457 385 ntBASIC4.86□□□□□ -1.63
CDH11P55287 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.86□□□□□ -1.63
CDH11P55287 AL390334.1-201ENST00000556395 450 ntBASIC4.86□□□□□ -1.63
CDH11P55287 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.86□□□□□ -1.63
CDH11P55287 AC007342.5-201ENST00000571340 2142 ntBASIC4.86□□□□□ -1.63
CDH11P55287 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.86□□□□□ -1.63
CDH11P55287 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.86□□□□□ -1.63
CDH11P55287 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.86□□□□□ -1.63
CDH11P55287 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.86□□□□□ -1.63
CDH11P55287 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.86□□□□□ -1.63
CDH11P55287 AC245389.2-201ENST00000616023 576 ntBASIC4.86□□□□□ -1.63
CDH11P55287 AC109583.2-201ENST00000617367 129 ntBASIC4.86□□□□□ -1.63
CDH11P55287 AL645927.2-201ENST00000618350 349 ntBASIC4.86□□□□□ -1.63
CDH11P55287 AC242843.1-201ENST00000618702 573 ntBASIC4.86□□□□□ -1.63
CDH11P55287 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.86□□□□□ -1.63
CDH11P55287 AC095038.2-201ENST00000621464 1070 ntBASIC4.86□□□□□ -1.63
CDH11P55287 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.86□□□□□ -1.63
CDH11P55287 SAMMSON-227ENST00000642114 1199 ntBASIC4.86□□□□□ -1.63
CDH11P55287 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
CDH11P55287 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CDH11P55287 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.86□□□□□ -1.63
CDH11P55287 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.86□□□□□ -1.63
CDH11P55287 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CDH11P55287 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.86□□□□□ -1.63
CDH11P55287 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDH11P55287 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
CDH11P55287 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDH11P55287 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDH11P55287 AC004817.4-201ENST00000602396 3625 ntBASIC4.85□□□□□ -1.63
CDH11P55287 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CDH11P55287 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDH11P55287 AL672167.2-201ENST00000377164 879 ntBASIC4.85□□□□□ -1.63
CDH11P55287 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.85□□□□□ -1.63
CDH11P55287 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDH11P55287 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
CDH11P55287 SNORA11B-201ENST00000408175 129 ntBASIC4.85□□□□□ -1.63
CDH11P55287 MIR1178-201ENST00000408396 91 ntBASIC4.85□□□□□ -1.63
CDH11P55287 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.85□□□□□ -1.63
CDH11P55287 AC124944.2-201ENST00000429866 1242 ntBASIC4.85□□□□□ -1.63
CDH11P55287 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.85□□□□□ -1.63
CDH11P55287 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.85□□□□□ -1.63
CDH11P55287 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.85□□□□□ -1.63
CDH11P55287 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.85□□□□□ -1.63
CDH11P55287 RANP1-206ENST00000455094 651 ntBASIC4.85□□□□□ -1.63
CDH11P55287 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.85□□□□□ -1.63
CDH11P55287 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.85□□□□□ -1.63
CDH11P55287 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.85□□□□□ -1.63
CDH11P55287 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CDH11P55287 OR11I1P-201ENST00000486033 954 ntBASIC4.85□□□□□ -1.63
CDH11P55287 EIF1P7-201ENST00000487533 337 ntBASIC4.85□□□□□ -1.63
CDH11P55287 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.85□□□□□ -1.63
CDH11P55287 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.85□□□□□ -1.63
CDH11P55287 AC021087.2-201ENST00000504656 1203 ntBASIC4.85□□□□□ -1.63
CDH11P55287 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDH11P55287 AC034244.2-201ENST00000514668 858 ntBASIC4.85□□□□□ -1.63
CDH11P55287 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.85□□□□□ -1.63
CDH11P55287 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.85□□□□□ -1.63
CDH11P55287 AC022360.1-201ENST00000521058 340 ntBASIC4.85□□□□□ -1.63
CDH11P55287 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.85□□□□□ -1.63
CDH11P55287 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.85□□□□□ -1.63
CDH11P55287 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.85□□□□□ -1.63
CDH11P55287 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.85□□□□□ -1.63
CDH11P55287 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.85□□□□□ -1.63
CDH11P55287 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CDH11P55287 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDH11P55287 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.85□□□□□ -1.63
CDH11P55287 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.85□□□□□ -1.63
CDH11P55287 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDH11P55287 AC005242.1-201ENST00000585658 438 ntBASIC4.85□□□□□ -1.63
CDH11P55287 AC012616.1-201ENST00000600294 197 ntBASIC4.85□□□□□ -1.63
CDH11P55287 ABI1P1-201ENST00000603375 1120 ntBASIC4.85□□□□□ -1.63
CDH11P55287 AC011458.1-201ENST00000604034 617 ntBASIC4.85□□□□□ -1.63
CDH11P55287 IMMP1LP3-201ENST00000604197 224 ntBASIC4.85□□□□□ -1.63
CDH11P55287 SUGT1P3-202ENST00000604259 383 ntBASIC4.85□□□□□ -1.63
CDH11P55287 AC009027.1-201ENST00000604510 479 ntBASIC4.85□□□□□ -1.63
CDH11P55287 BNIP3P35-201ENST00000604530 490 ntBASIC4.85□□□□□ -1.63
CDH11P55287 AC105148.1-201ENST00000604961 409 ntBASIC4.85□□□□□ -1.63
CDH11P55287 AC007204.2-201ENST00000615022 616 ntBASIC4.85□□□□□ -1.63
CDH11P55287 MIR6839-201ENST00000620425 113 ntBASIC4.85□□□□□ -1.63
CDH11P55287 AC010872.1-201ENST00000624225 675 ntBASIC4.85□□□□□ -1.63
CDH11P55287 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.85□□□□□ -1.63
CDH11P55287 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.85□□□□□ -1.63
CDH11P55287 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDH11P55287 AC011503.2-201ENST00000594230 1500 ntBASIC4.85□□□□□ -1.63
CDH11P55287 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDH11P55287 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDH11P55287 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDH11P55287 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDH11P55287 AC132825.1-201ENST00000463573 2247 ntBASIC4.85□□□□□ -1.63
CDH11P55287 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.85□□□□□ -1.63
CDH11P55287 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDH11P55287 SMG1P7-201ENST00000565246 2704 ntBASIC4.85□□□□□ -1.63
CDH11P55287 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.85□□□□□ -1.63
CDH11P55287 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDH11P55287 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CDH11P55287 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDH11P55287 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDH11P55287 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms