Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.11□□□□□ -1.59
CDH4P55283 PCNPP1-201ENST00000552501 511 ntBASIC5.11□□□□□ -1.59
CDH4P55283 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.11□□□□□ -1.59
CDH4P55283 AL121839.1-201ENST00000556233 1185 ntBASIC5.11□□□□□ -1.59
CDH4P55283 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.11□□□□□ -1.59
CDH4P55283 AP005262.1-201ENST00000582646 997 ntBASIC5.11□□□□□ -1.59
CDH4P55283 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.11□□□□□ -1.59
CDH4P55283 AC005084.1-201ENST00000605160 304 ntBASIC5.11□□□□□ -1.59
CDH4P55283 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.11□□□□□ -1.59
CDH4P55283 MIR6730-201ENST00000622213 67 ntBASIC5.11□□□□□ -1.59
CDH4P55283 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.11□□□□□ -1.59
CDH4P55283 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CDH4P55283 TCP1P3-201ENST00000414406 1498 ntBASIC5.11□□□□□ -1.59
CDH4P55283 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDH4P55283 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH4P55283 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.11□□□□□ -1.59
CDH4P55283 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CDH4P55283 AC002525.1-201ENST00000624392 1622 ntBASIC5.11□□□□□ -1.59
CDH4P55283 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDH4P55283 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDH4P55283 AC083843.2-201ENST00000568248 6253 ntBASIC5.1□□□□□ -1.59
CDH4P55283 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDH4P55283 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CDH4P55283 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.1□□□□□ -1.59
CDH4P55283 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDH4P55283 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDH4P55283 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDH4P55283 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDH4P55283 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDH4P55283 MIR550A3-201ENST00000390735 95 ntBASIC5.1□□□□□ -1.59
CDH4P55283 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.1□□□□□ -1.59
CDH4P55283 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.1□□□□□ -1.59
CDH4P55283 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.1□□□□□ -1.59
CDH4P55283 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.1□□□□□ -1.59
CDH4P55283 OR2AM1P-201ENST00000422137 422 ntBASIC5.1□□□□□ -1.59
CDH4P55283 AL590762.4-201ENST00000425885 253 ntBASIC5.1□□□□□ -1.59
CDH4P55283 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.1□□□□□ -1.59
CDH4P55283 AC112498.1-201ENST00000444401 332 ntBASIC5.1□□□□□ -1.59
CDH4P55283 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.1□□□□□ -1.59
CDH4P55283 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.1□□□□□ -1.59
CDH4P55283 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDH4P55283 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.1□□□□□ -1.59
CDH4P55283 AL645937.3-201ENST00000453647 936 ntBASIC5.1□□□□□ -1.59
CDH4P55283 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.1□□□□□ -1.59
CDH4P55283 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.1□□□□□ -1.59
CDH4P55283 RPS17P2-201ENST00000461663 408 ntBASIC5.1□□□□□ -1.59
CDH4P55283 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDH4P55283 RPL7P16-201ENST00000479738 738 ntBASIC5.1□□□□□ -1.59
CDH4P55283 AC231760.1-201ENST00000498002 260 ntBASIC5.1□□□□□ -1.59
CDH4P55283 MRPS33P2-201ENST00000507850 322 ntBASIC5.1□□□□□ -1.59
CDH4P55283 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.1□□□□□ -1.59
CDH4P55283 RNU6-513P-201ENST00000516104 104 ntBASIC5.1□□□□□ -1.59
CDH4P55283 RNU4-18P-201ENST00000516751 149 ntBASIC5.1□□□□□ -1.59
CDH4P55283 OR10D4P-201ENST00000525892 951 ntBASIC5.1□□□□□ -1.59
CDH4P55283 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.1□□□□□ -1.59
CDH4P55283 OR5D15P-201ENST00000531671 942 ntBASIC5.1□□□□□ -1.59
CDH4P55283 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDH4P55283 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CDH4P55283 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.1□□□□□ -1.59
CDH4P55283 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.1□□□□□ -1.59
CDH4P55283 SETP1-201ENST00000556014 845 ntBASIC5.1□□□□□ -1.59
CDH4P55283 AC116553.2-201ENST00000564203 463 ntBASIC5.1□□□□□ -1.59
CDH4P55283 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.1□□□□□ -1.59
CDH4P55283 BX323046.1-201ENST00000610145 535 ntBASIC5.1□□□□□ -1.59
CDH4P55283 AL049794.2-201ENST00000616301 365 ntBASIC5.1□□□□□ -1.59
CDH4P55283 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.1□□□□□ -1.59
CDH4P55283 TMEM30CP-203ENST00000637814 1035 ntBASIC5.1□□□□□ -1.59
CDH4P55283 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.1□□□□□ -1.59
CDH4P55283 AC063976.2-201ENST00000425667 3556 ntBASIC5.1□□□□□ -1.59
CDH4P55283 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDH4P55283 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.09□□□□□ -1.59
CDH4P55283 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.09□□□□□ -1.59
CDH4P55283 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.09□□□□□ -1.59
CDH4P55283 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDH4P55283 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.09□□□□□ -1.59
CDH4P55283 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CDH4P55283 AC104260.2-201ENST00000623551 3497 ntBASIC5.09□□□□□ -1.59
CDH4P55283 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDH4P55283 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDH4P55283 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CDH4P55283 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDH4P55283 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.09□□□□□ -1.59
CDH4P55283 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDH4P55283 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.09□□□□□ -1.59
CDH4P55283 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
CDH4P55283 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDH4P55283 RNU4-44P-201ENST00000363050 141 ntBASIC5.09□□□□□ -1.59
CDH4P55283 SNORA73.1-201ENST00000363107 205 ntBASIC5.09□□□□□ -1.59
CDH4P55283 GAPDHP15-201ENST00000398586 975 ntBASIC5.09□□□□□ -1.59
CDH4P55283 AL133270.1-201ENST00000402635 279 ntBASIC5.09□□□□□ -1.59
CDH4P55283 RN7SKP16-201ENST00000410180 299 ntBASIC5.09□□□□□ -1.59
CDH4P55283 SNORA79B-201ENST00000410557 148 ntBASIC5.09□□□□□ -1.59
CDH4P55283 COX6B1P1-201ENST00000415962 213 ntBASIC5.09□□□□□ -1.59
CDH4P55283 AC096644.3-201ENST00000416788 338 ntBASIC5.09□□□□□ -1.59
CDH4P55283 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.09□□□□□ -1.59
CDH4P55283 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.09□□□□□ -1.59
CDH4P55283 PA2G4P6-201ENST00000438325 1197 ntBASIC5.09□□□□□ -1.59
CDH4P55283 RPL5P25-201ENST00000441148 775 ntBASIC5.09□□□□□ -1.59
CDH4P55283 RPL31P44-201ENST00000447680 377 ntBASIC5.09□□□□□ -1.59
CDH4P55283 AL591623.2-201ENST00000449978 222 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms