Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.59□□□□□ -1.35
MRE11P49959 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC6.59□□□□□ -1.35
MRE11P49959 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.59□□□□□ -1.35
MRE11P49959 AC093014.1-201ENST00000548926 724 ntBASIC6.59□□□□□ -1.35
MRE11P49959 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.59□□□□□ -1.35
MRE11P49959 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC6.59□□□□□ -1.35
MRE11P49959 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.59□□□□□ -1.35
MRE11P49959 MIR4697-201ENST00000582977 78 ntBASIC6.59□□□□□ -1.35
MRE11P49959 EIF1P5-201ENST00000585002 234 ntBASIC6.59□□□□□ -1.35
MRE11P49959 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.59□□□□□ -1.35
MRE11P49959 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.59□□□□□ -1.35
MRE11P49959 AC015726.1-201ENST00000602353 681 ntBASIC6.59□□□□□ -1.35
MRE11P49959 OR7A19P-201ENST00000608051 733 ntBASIC6.59□□□□□ -1.35
MRE11P49959 AC093875.1-201ENST00000623688 504 ntBASIC6.59□□□□□ -1.35
MRE11P49959 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC6.59□□□□□ -1.35
MRE11P49959 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.59□□□□□ -1.35
MRE11P49959 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
MRE11P49959 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.59□□□□□ -1.35
MRE11P49959 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
MRE11P49959 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
MRE11P49959 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.59□□□□□ -1.35
MRE11P49959 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.59□□□□□ -1.35
MRE11P49959 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.36
MRE11P49959 AC005005.4-201ENST00000623789 16698 ntBASIC6.59□□□□□ -1.36
MRE11P49959 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
MRE11P49959 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
MRE11P49959 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
MRE11P49959 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
MRE11P49959 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
MRE11P49959 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
MRE11P49959 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
MRE11P49959 AL355578.1-201ENST00000607405 1328 ntBASIC6.58□□□□□ -1.36
MRE11P49959 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
MRE11P49959 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC6.58□□□□□ -1.36
MRE11P49959 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
MRE11P49959 RNA5SP132-201ENST00000364725 118 ntBASIC6.58□□□□□ -1.36
MRE11P49959 RN7SKP28-201ENST00000364770 305 ntBASIC6.58□□□□□ -1.36
MRE11P49959 CD2-201ENST00000369477 478 ntTSL 2 BASIC6.58□□□□□ -1.36
MRE11P49959 RNA5SP241-201ENST00000391326 114 ntBASIC6.58□□□□□ -1.36
MRE11P49959 GAPDHP15-201ENST00000398586 975 ntBASIC6.58□□□□□ -1.36
MRE11P49959 AL355615.1-201ENST00000406187 641 ntBASIC6.58□□□□□ -1.36
MRE11P49959 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
MRE11P49959 BX664727.1-201ENST00000416024 466 ntBASIC6.58□□□□□ -1.36
MRE11P49959 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
MRE11P49959 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.58□□□□□ -1.36
MRE11P49959 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC6.58□□□□□ -1.36
MRE11P49959 MORF4L1P6-201ENST00000418771 268 ntBASIC6.58□□□□□ -1.36
MRE11P49959 ARAFP1-201ENST00000422172 605 ntBASIC6.58□□□□□ -1.36
MRE11P49959 BX119904.4-201ENST00000424402 301 ntBASIC6.58□□□□□ -1.36
MRE11P49959 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.58□□□□□ -1.36
MRE11P49959 UBE2V1P1-201ENST00000430836 445 ntBASIC6.58□□□□□ -1.36
MRE11P49959 RPS26P4-201ENST00000431743 355 ntBASIC6.58□□□□□ -1.36
MRE11P49959 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC6.58□□□□□ -1.36
MRE11P49959 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.58□□□□□ -1.36
MRE11P49959 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.58□□□□□ -1.36
MRE11P49959 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.58□□□□□ -1.36
MRE11P49959 MTCO1P53-201ENST00000441633 699 ntBASIC6.58□□□□□ -1.36
MRE11P49959 AC112492.1-201ENST00000449607 712 ntBASIC6.58□□□□□ -1.36
MRE11P49959 AC104164.1-201ENST00000460282 590 ntBASIC6.58□□□□□ -1.36
MRE11P49959 MTCO3P35-201ENST00000485582 781 ntBASIC6.58□□□□□ -1.36
MRE11P49959 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.58□□□□□ -1.36
MRE11P49959 SUMO2P4-201ENST00000504193 276 ntBASIC6.58□□□□□ -1.36
MRE11P49959 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.58□□□□□ -1.36
MRE11P49959 OR4D12P-201ENST00000509361 911 ntBASIC6.58□□□□□ -1.36
MRE11P49959 MTND1P22-201ENST00000510572 951 ntBASIC6.58□□□□□ -1.36
MRE11P49959 AC109464.1-201ENST00000511091 819 ntBASIC6.58□□□□□ -1.36
MRE11P49959 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC6.58□□□□□ -1.36
MRE11P49959 RNU6-276P-201ENST00000516114 96 ntBASIC6.58□□□□□ -1.36
MRE11P49959 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.58□□□□□ -1.36
MRE11P49959 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC6.58□□□□□ -1.36
MRE11P49959 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC6.58□□□□□ -1.36
MRE11P49959 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.58□□□□□ -1.36
MRE11P49959 AC079064.1-201ENST00000528365 362 ntBASIC6.58□□□□□ -1.36
MRE11P49959 AC027026.1-201ENST00000532323 742 ntBASIC6.58□□□□□ -1.36
MRE11P49959 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.58□□□□□ -1.36
MRE11P49959 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC6.58□□□□□ -1.36
MRE11P49959 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC6.58□□□□□ -1.36
MRE11P49959 MTCYBP23-201ENST00000558717 1102 ntBASIC6.58□□□□□ -1.36
MRE11P49959 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC6.58□□□□□ -1.36
MRE11P49959 MIR4472-2-201ENST00000582069 67 ntBASIC6.58□□□□□ -1.36
MRE11P49959 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.58□□□□□ -1.36
MRE11P49959 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.58□□□□□ -1.36
MRE11P49959 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC6.58□□□□□ -1.36
MRE11P49959 AL096803.3-201ENST00000609032 532 ntBASIC6.58□□□□□ -1.36
MRE11P49959 AL080312.2-201ENST00000613001 630 ntBASIC6.58□□□□□ -1.36
MRE11P49959 AC090116.1-201ENST00000615679 446 ntBASIC6.58□□□□□ -1.36
MRE11P49959 AC078883.4-201ENST00000623218 367 ntBASIC6.58□□□□□ -1.36
MRE11P49959 AC079416.3-201ENST00000624479 549 ntBASIC6.58□□□□□ -1.36
MRE11P49959 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
MRE11P49959 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
MRE11P49959 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.58□□□□□ -1.36
MRE11P49959 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
MRE11P49959 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
MRE11P49959 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.58□□□□□ -1.36
MRE11P49959 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.58□□□□□ -1.36
MRE11P49959 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.57□□□□□ -1.36
MRE11P49959 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
MRE11P49959 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
MRE11P49959 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
MRE11P49959 AC120338.1-201ENST00000625074 1541 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms