Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC016839.1-201ENST00000578162 867 ntBASIC4.91□□□□□ -1.62
RPA3P35244 OR7E18P-201ENST00000592589 702 ntBASIC4.91□□□□□ -1.62
RPA3P35244 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.91□□□□□ -1.62
RPA3P35244 NXF4-202ENST00000416098 1465 ntBASIC4.91□□□□□ -1.62
RPA3P35244 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.91□□□□□ -1.62
RPA3P35244 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RPA3P35244 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RPA3P35244 AC108751.5-201ENST00000492880 1336 ntBASIC4.91□□□□□ -1.62
RPA3P35244 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.91□□□□□ -1.62
RPA3P35244 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RPA3P35244 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.91□□□□□ -1.62
RPA3P35244 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
RPA3P35244 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
RPA3P35244 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
RPA3P35244 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
RPA3P35244 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.9□□□□□ -1.62
RPA3P35244 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.9□□□□□ -1.62
RPA3P35244 RNA5SP455-201ENST00000365190 119 ntBASIC4.9□□□□□ -1.63
RPA3P35244 RNU1-106P-201ENST00000384382 164 ntBASIC4.9□□□□□ -1.63
RPA3P35244 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.9□□□□□ -1.63
RPA3P35244 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.9□□□□□ -1.63
RPA3P35244 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.9□□□□□ -1.63
RPA3P35244 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.9□□□□□ -1.63
RPA3P35244 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.9□□□□□ -1.63
RPA3P35244 RPS27P18-201ENST00000431701 247 ntBASIC4.9□□□□□ -1.63
RPA3P35244 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.9□□□□□ -1.63
RPA3P35244 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.9□□□□□ -1.63
RPA3P35244 AC004938.1-201ENST00000438468 308 ntBASIC4.9□□□□□ -1.63
RPA3P35244 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.9□□□□□ -1.63
RPA3P35244 KNOP1P3-201ENST00000446933 426 ntBASIC4.9□□□□□ -1.63
RPA3P35244 AL161722.1-201ENST00000446972 1032 ntBASIC4.9□□□□□ -1.63
RPA3P35244 AL354714.3-201ENST00000447284 493 ntBASIC4.9□□□□□ -1.63
RPA3P35244 NDUFA5P8-201ENST00000449019 346 ntBASIC4.9□□□□□ -1.63
RPA3P35244 TCEA1P1-201ENST00000449716 880 ntBASIC4.9□□□□□ -1.63
RPA3P35244 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.9□□□□□ -1.63
RPA3P35244 AC090114.3-201ENST00000479267 829 ntBASIC4.9□□□□□ -1.63
RPA3P35244 RN7SL244P-201ENST00000493405 297 ntBASIC4.9□□□□□ -1.63
RPA3P35244 OR2A3P-201ENST00000493774 953 ntBASIC4.9□□□□□ -1.63
RPA3P35244 AC093763.2-201ENST00000505334 1223 ntBASIC4.9□□□□□ -1.63
RPA3P35244 AC004980.4-201ENST00000513375 203 ntBASIC4.9□□□□□ -1.63
RPA3P35244 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.9□□□□□ -1.63
RPA3P35244 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.9□□□□□ -1.63
RPA3P35244 NMNAT1P1-201ENST00000554095 876 ntBASIC4.9□□□□□ -1.63
RPA3P35244 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.9□□□□□ -1.63
RPA3P35244 AL049794.2-201ENST00000616301 365 ntBASIC4.9□□□□□ -1.63
RPA3P35244 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.9□□□□□ -1.63
RPA3P35244 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.9□□□□□ -1.63
RPA3P35244 LINC01739-205ENST00000641890 573 ntBASIC4.9□□□□□ -1.63
RPA3P35244 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
RPA3P35244 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
RPA3P35244 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.89□□□□□ -1.63
RPA3P35244 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
RPA3P35244 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
RPA3P35244 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
RPA3P35244 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
RPA3P35244 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.89□□□□□ -1.63
RPA3P35244 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RPA3P35244 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
RPA3P35244 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.89□□□□□ -1.63
RPA3P35244 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.89□□□□□ -1.63
RPA3P35244 CBX1P3-201ENST00000413296 527 ntBASIC4.89□□□□□ -1.63
RPA3P35244 AC093162.1-201ENST00000419682 124 ntBASIC4.89□□□□□ -1.63
RPA3P35244 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.89□□□□□ -1.63
RPA3P35244 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.89□□□□□ -1.63
RPA3P35244 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.89□□□□□ -1.63
RPA3P35244 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.89□□□□□ -1.63
RPA3P35244 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
RPA3P35244 AC092647.3-201ENST00000443044 633 ntBASIC4.89□□□□□ -1.63
RPA3P35244 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.89□□□□□ -1.63
RPA3P35244 CEACAMP7-201ENST00000444105 496 ntBASIC4.89□□□□□ -1.63
RPA3P35244 AC073850.1-201ENST00000449243 255 ntBASIC4.89□□□□□ -1.63
RPA3P35244 IGHV5-78-201ENST00000450948 295 ntBASIC4.89□□□□□ -1.63
RPA3P35244 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.89□□□□□ -1.63
RPA3P35244 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.89□□□□□ -1.63
RPA3P35244 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.89□□□□□ -1.63
RPA3P35244 RPL23AP37-201ENST00000479658 549 ntBASIC4.89□□□□□ -1.63
RPA3P35244 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RPA3P35244 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.89□□□□□ -1.63
RPA3P35244 OR5M14P-201ENST00000506803 618 ntBASIC4.89□□□□□ -1.63
RPA3P35244 COX6B1P5-201ENST00000509843 249 ntBASIC4.89□□□□□ -1.63
RPA3P35244 AC013701.1-201ENST00000522657 465 ntBASIC4.89□□□□□ -1.63
RPA3P35244 OR7E128P-201ENST00000532736 1024 ntBASIC4.89□□□□□ -1.63
RPA3P35244 HMGN2P6-201ENST00000551091 273 ntBASIC4.89□□□□□ -1.63
RPA3P35244 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.89□□□□□ -1.63
RPA3P35244 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.89□□□□□ -1.63
RPA3P35244 AC087783.2-201ENST00000605070 562 ntBASIC4.89□□□□□ -1.63
RPA3P35244 EIF3FP1-201ENST00000613970 806 ntBASIC4.89□□□□□ -1.63
RPA3P35244 ECM1P2-201ENST00000503354 1577 ntBASIC4.89□□□□□ -1.63
RPA3P35244 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RPA3P35244 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RPA3P35244 AC109780.1-201ENST00000451768 1344 ntBASIC4.89□□□□□ -1.63
RPA3P35244 HSPA8P18-201ENST00000439846 1928 ntBASIC4.89□□□□□ -1.63
RPA3P35244 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RPA3P35244 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RPA3P35244 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
RPA3P35244 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.89□□□□□ -1.63
RPA3P35244 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
RPA3P35244 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
RPA3P35244 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RPA3P35244 Z97832.1-201ENST00000402490 328 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms