Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 TXNP2-201ENST00000443918 295 ntBASIC5.17□□□□□ -1.58
CDH3P22223 AC105918.1-201ENST00000474399 838 ntBASIC5.17□□□□□ -1.58
CDH3P22223 RPL7P40-201ENST00000481703 745 ntBASIC5.17□□□□□ -1.58
CDH3P22223 RN7SL809P-201ENST00000482040 297 ntBASIC5.17□□□□□ -1.58
CDH3P22223 RPL37AP8-201ENST00000494116 276 ntBASIC5.17□□□□□ -1.58
CDH3P22223 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH3P22223 MYL12BP2-201ENST00000503948 512 ntBASIC5.17□□□□□ -1.58
CDH3P22223 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH3P22223 OR4A17P-201ENST00000526032 904 ntBASIC5.17□□□□□ -1.58
CDH3P22223 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.17□□□□□ -1.58
CDH3P22223 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH3P22223 AC051619.2-201ENST00000559063 397 ntBASIC5.17□□□□□ -1.58
CDH3P22223 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.17□□□□□ -1.58
CDH3P22223 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH3P22223 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH3P22223 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH3P22223 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH3P22223 AC211433.2-201ENST00000608433 387 ntBASIC5.17□□□□□ -1.58
CDH3P22223 AC126915.2-201ENST00000610957 190 ntBASIC5.17□□□□□ -1.58
CDH3P22223 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH3P22223 uc_338.7-201ENST00000621834 124 ntBASIC5.17□□□□□ -1.58
CDH3P22223 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH3P22223 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CDH3P22223 OR52B5P-202ENST00000641118 1110 ntBASIC5.17□□□□□ -1.58
CDH3P22223 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CDH3P22223 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH3P22223 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CDH3P22223 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH3P22223 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH3P22223 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH3P22223 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CDH3P22223 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.17□□□□□ -1.58
CDH3P22223 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.17□□□□□ -1.58
CDH3P22223 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDH3P22223 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH3P22223 MTND4P21-201ENST00000453886 1357 ntBASIC5.16□□□□□ -1.58
CDH3P22223 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH3P22223 SCARNA15-201ENST00000607520 4325 ntBASIC5.16□□□□□ -1.58
CDH3P22223 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH3P22223 AC008079.2-201ENST00000623543 20396 ntBASIC5.16□□□□□ -1.58
CDH3P22223 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH3P22223 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
CDH3P22223 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDH3P22223 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDH3P22223 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CDH3P22223 MIR365B-201ENST00000362317 111 ntBASIC5.16□□□□□ -1.58
CDH3P22223 RNU1-19P-201ENST00000363306 165 ntBASIC5.16□□□□□ -1.58
CDH3P22223 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.16□□□□□ -1.58
CDH3P22223 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH3P22223 OR4K12P-201ENST00000406538 961 ntBASIC5.16□□□□□ -1.58
CDH3P22223 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.16□□□□□ -1.58
CDH3P22223 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH3P22223 BMS1P13-201ENST00000417301 885 ntBASIC5.16□□□□□ -1.58
CDH3P22223 AC093655.2-201ENST00000425735 631 ntBASIC5.16□□□□□ -1.58
CDH3P22223 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.16□□□□□ -1.58
CDH3P22223 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.16□□□□□ -1.58
CDH3P22223 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.16□□□□□ -1.58
CDH3P22223 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH3P22223 AC245047.2-201ENST00000441060 530 ntBASIC5.16□□□□□ -1.58
CDH3P22223 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH3P22223 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.16□□□□□ -1.58
CDH3P22223 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.16□□□□□ -1.58
CDH3P22223 AL133244.1-201ENST00000456007 258 ntBASIC5.16□□□□□ -1.58
CDH3P22223 AC021660.1-201ENST00000465006 554 ntBASIC5.16□□□□□ -1.58
CDH3P22223 AC022336.1-201ENST00000475510 337 ntBASIC5.16□□□□□ -1.58
CDH3P22223 RPS18P6-201ENST00000476880 458 ntBASIC5.16□□□□□ -1.58
CDH3P22223 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.16□□□□□ -1.58
CDH3P22223 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH3P22223 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.16□□□□□ -1.58
CDH3P22223 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH3P22223 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CDH3P22223 RNU6-760P-201ENST00000516078 97 ntBASIC5.16□□□□□ -1.58
CDH3P22223 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.16□□□□□ -1.58
CDH3P22223 AP006245.2-201ENST00000522004 300 ntBASIC5.16□□□□□ -1.58
CDH3P22223 RN7SL356P-201ENST00000582228 248 ntBASIC5.16□□□□□ -1.58
CDH3P22223 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.16□□□□□ -1.58
CDH3P22223 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH3P22223 AC069307.1-201ENST00000602820 447 ntBASIC5.16□□□□□ -1.58
CDH3P22223 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH3P22223 AL139124.1-201ENST00000609123 421 ntBASIC5.16□□□□□ -1.58
CDH3P22223 AL121612.2-201ENST00000612261 482 ntBASIC5.16□□□□□ -1.58
CDH3P22223 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH3P22223 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.16□□□□□ -1.58
CDH3P22223 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH3P22223 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH3P22223 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CDH3P22223 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CDH3P22223 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH3P22223 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDH3P22223 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CDH3P22223 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDH3P22223 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH3P22223 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.16□□□□□ -1.58
CDH3P22223 NEAT1-202ENST00000501122 22743 ntBASIC5.15□□□□□ -1.58
CDH3P22223 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
CDH3P22223 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CDH3P22223 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
CDH3P22223 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CDH3P22223 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CDH3P22223 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms