Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 SEPT7P8-201ENST00000413308 775 ntBASIC5.41□□□□□ -1.54
TPM1P09493 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.41□□□□□ -1.54
TPM1P09493 IPPKP1-201ENST00000422501 768 ntBASIC5.41□□□□□ -1.54
TPM1P09493 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TPM1P09493 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.41□□□□□ -1.54
TPM1P09493 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.41□□□□□ -1.54
TPM1P09493 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.41□□□□□ -1.54
TPM1P09493 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.41□□□□□ -1.54
TPM1P09493 HMGN1P2-201ENST00000445197 310 ntBASIC5.41□□□□□ -1.54
TPM1P09493 RPS17P2-201ENST00000461663 408 ntBASIC5.41□□□□□ -1.54
TPM1P09493 AC084754.1-201ENST00000463466 464 ntBASIC5.41□□□□□ -1.54
TPM1P09493 RPL7AP28-201ENST00000464513 571 ntBASIC5.41□□□□□ -1.54
TPM1P09493 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.41□□□□□ -1.54
TPM1P09493 RPS21P4-201ENST00000487122 248 ntBASIC5.41□□□□□ -1.54
TPM1P09493 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
TPM1P09493 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.41□□□□□ -1.54
TPM1P09493 AC010350.1-201ENST00000504908 231 ntBASIC5.41□□□□□ -1.54
TPM1P09493 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.41□□□□□ -1.54
TPM1P09493 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.41□□□□□ -1.54
TPM1P09493 AC018442.3-201ENST00000523025 183 ntBASIC5.41□□□□□ -1.54
TPM1P09493 MTND2P17-201ENST00000550281 688 ntBASIC5.41□□□□□ -1.54
TPM1P09493 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.41□□□□□ -1.54
TPM1P09493 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.41□□□□□ -1.54
TPM1P09493 AC027243.2-201ENST00000602530 724 ntBASIC5.41□□□□□ -1.54
TPM1P09493 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.41□□□□□ -1.54
TPM1P09493 AC104695.2-201ENST00000605056 775 ntBASIC5.41□□□□□ -1.54
TPM1P09493 AC005840.5-201ENST00000619166 599 ntBASIC5.41□□□□□ -1.54
TPM1P09493 AC079298.2-201ENST00000623885 459 ntBASIC5.41□□□□□ -1.54
TPM1P09493 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.41□□□□□ -1.54
TPM1P09493 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TPM1P09493 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.41□□□□□ -1.54
TPM1P09493 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.4□□□□□ -1.54
TPM1P09493 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.4□□□□□ -1.54
TPM1P09493 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
TPM1P09493 OR14L1P-202ENST00000641545 3009 ntBASIC5.4□□□□□ -1.54
TPM1P09493 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
TPM1P09493 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
TPM1P09493 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TPM1P09493 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.4□□□□□ -1.54
TPM1P09493 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
TPM1P09493 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
TPM1P09493 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.4□□□□□ -1.54
TPM1P09493 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
TPM1P09493 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.4□□□□□ -1.54
TPM1P09493 RNA5SP372-201ENST00000390836 115 ntBASIC5.4□□□□□ -1.54
TPM1P09493 ATP5HP3-201ENST00000396994 486 ntBASIC5.4□□□□□ -1.54
TPM1P09493 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.4□□□□□ -1.54
TPM1P09493 AC009804.1-201ENST00000400949 179 ntBASIC5.4□□□□□ -1.54
TPM1P09493 RN7SKP114-201ENST00000410327 279 ntBASIC5.4□□□□□ -1.54
TPM1P09493 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.4□□□□□ -1.54
TPM1P09493 Z80107.2-201ENST00000445127 392 ntBASIC5.4□□□□□ -1.54
TPM1P09493 NPM1P39-201ENST00000449818 867 ntBASIC5.4□□□□□ -1.54
TPM1P09493 OR52E7P-201ENST00000452394 933 ntBASIC5.4□□□□□ -1.54
TPM1P09493 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.4□□□□□ -1.54
TPM1P09493 EIF2S2P5-201ENST00000457635 968 ntBASIC5.4□□□□□ -1.54
TPM1P09493 PFN1P8-201ENST00000497012 543 ntBASIC5.4□□□□□ -1.54
TPM1P09493 RN7SL466P-201ENST00000497546 295 ntBASIC5.4□□□□□ -1.54
TPM1P09493 AC113430.1-201ENST00000506872 718 ntBASIC5.4□□□□□ -1.54
TPM1P09493 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.4□□□□□ -1.54
TPM1P09493 AC011411.1-201ENST00000509592 876 ntBASIC5.4□□□□□ -1.54
TPM1P09493 RN7SKP260-201ENST00000516907 149 ntBASIC5.4□□□□□ -1.54
TPM1P09493 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.4□□□□□ -1.54
TPM1P09493 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.4□□□□□ -1.54
TPM1P09493 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.4□□□□□ -1.54
TPM1P09493 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.4□□□□□ -1.54
TPM1P09493 AC122134.1-201ENST00000565664 1104 ntBASIC5.4□□□□□ -1.54
TPM1P09493 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.4□□□□□ -1.54
TPM1P09493 AC134669.1-201ENST00000581275 672 ntBASIC5.4□□□□□ -1.54
TPM1P09493 MIR5010-201ENST00000582846 120 ntBASIC5.4□□□□□ -1.54
TPM1P09493 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.4□□□□□ -1.54
TPM1P09493 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.4□□□□□ -1.54
TPM1P09493 RPL26P30-202ENST00000602923 645 ntBASIC5.4□□□□□ -1.54
TPM1P09493 AL133406.3-201ENST00000606817 541 ntBASIC5.4□□□□□ -1.54
TPM1P09493 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.4□□□□□ -1.54
TPM1P09493 AC140113.4-201ENST00000622087 222 ntBASIC5.4□□□□□ -1.54
TPM1P09493 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.4□□□□□ -1.54
TPM1P09493 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.4□□□□□ -1.54
TPM1P09493 RLIMP2-201ENST00000427891 1563 ntBASIC5.4□□□□□ -1.55
TPM1P09493 ECM1P2-201ENST00000503354 1577 ntBASIC5.4□□□□□ -1.55
TPM1P09493 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
TPM1P09493 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.4□□□□□ -1.55
TPM1P09493 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
TPM1P09493 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.39□□□□□ -1.55
TPM1P09493 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.39□□□□□ -1.55
TPM1P09493 RNF19BPY-201ENST00000458209 1550 ntBASIC5.39□□□□□ -1.55
TPM1P09493 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
TPM1P09493 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
TPM1P09493 AL672167.1-205ENST00000641112 3080 ntBASIC5.39□□□□□ -1.55
TPM1P09493 AC008549.2-201ENST00000333482 706 ntBASIC5.39□□□□□ -1.55
TPM1P09493 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TPM1P09493 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.39□□□□□ -1.55
TPM1P09493 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.39□□□□□ -1.55
TPM1P09493 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.39□□□□□ -1.55
TPM1P09493 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.39□□□□□ -1.55
TPM1P09493 BX323845.1-201ENST00000432417 179 ntBASIC5.39□□□□□ -1.55
TPM1P09493 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.39□□□□□ -1.55
TPM1P09493 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC5.39□□□□□ -1.55
TPM1P09493 RPL31P15-201ENST00000449770 338 ntBASIC5.39□□□□□ -1.55
TPM1P09493 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.39□□□□□ -1.55
TPM1P09493 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms