Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HMGB1P09429 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HMGB1P09429 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.79□□□□□ -1.32
HMGB1P09429 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HMGB1P09429 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
HMGB1P09429 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
HMGB1P09429 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HMGB1P09429 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HMGB1P09429 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
HMGB1P09429 OR7E101P-201ENST00000400428 513 ntBASIC6.79□□□□□ -1.32
HMGB1P09429 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
HMGB1P09429 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC6.79□□□□□ -1.32
HMGB1P09429 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.79□□□□□ -1.32
HMGB1P09429 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HMGB1P09429 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC6.79□□□□□ -1.32
HMGB1P09429 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC6.79□□□□□ -1.32
HMGB1P09429 ANKRD30BP3-201ENST00000444850 1070 ntBASIC6.79□□□□□ -1.32
HMGB1P09429 AC005002.1-201ENST00000447458 540 ntBASIC6.79□□□□□ -1.32
HMGB1P09429 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.79□□□□□ -1.32
HMGB1P09429 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HMGB1P09429 AC117394.1-201ENST00000477323 567 ntBASIC6.79□□□□□ -1.32
HMGB1P09429 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC6.79□□□□□ -1.32
HMGB1P09429 RPL37P23-201ENST00000492641 294 ntBASIC6.79□□□□□ -1.32
HMGB1P09429 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HMGB1P09429 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.79□□□□□ -1.32
HMGB1P09429 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC6.79□□□□□ -1.32
HMGB1P09429 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.79□□□□□ -1.32
HMGB1P09429 RN7SKP82-201ENST00000516786 223 ntBASIC6.79□□□□□ -1.32
HMGB1P09429 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.79□□□□□ -1.32
HMGB1P09429 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.79□□□□□ -1.32
HMGB1P09429 TOMM20P1-201ENST00000534518 427 ntBASIC6.79□□□□□ -1.32
HMGB1P09429 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC6.79□□□□□ -1.32
HMGB1P09429 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.79□□□□□ -1.32
HMGB1P09429 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.79□□□□□ -1.32
HMGB1P09429 AC092574.1-201ENST00000609771 420 ntBASIC6.79□□□□□ -1.32
HMGB1P09429 AC090607.5-201ENST00000615692 224 ntBASIC6.79□□□□□ -1.32
HMGB1P09429 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HMGB1P09429 AC078880.5-201ENST00000617845 421 ntBASIC6.79□□□□□ -1.32
HMGB1P09429 AC106730.3-201ENST00000624568 641 ntBASIC6.79□□□□□ -1.32
HMGB1P09429 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
HMGB1P09429 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.79□□□□□ -1.32
HMGB1P09429 ASNSP1-204ENST00000641977 1664 ntBASIC6.79□□□□□ -1.32
HMGB1P09429 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
HMGB1P09429 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.79□□□□□ -1.32
HMGB1P09429 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
HMGB1P09429 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
HMGB1P09429 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HMGB1P09429 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
HMGB1P09429 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
HMGB1P09429 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HMGB1P09429 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
HMGB1P09429 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
HMGB1P09429 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HMGB1P09429 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HMGB1P09429 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.78□□□□□ -1.32
HMGB1P09429 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HMGB1P09429 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HMGB1P09429 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
HMGB1P09429 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6.78□□□□□ -1.32
HMGB1P09429 AC016716.1-201ENST00000265882 708 ntBASIC6.78□□□□□ -1.32
HMGB1P09429 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
HMGB1P09429 SNORA51.12-201ENST00000384448 134 ntBASIC6.78□□□□□ -1.32
HMGB1P09429 MIR130A-201ENST00000385274 89 ntBASIC6.78□□□□□ -1.32
HMGB1P09429 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
HMGB1P09429 AC087752.1-201ENST00000391360 558 ntBASIC6.78□□□□□ -1.32
HMGB1P09429 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
HMGB1P09429 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.78□□□□□ -1.32
HMGB1P09429 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.78□□□□□ -1.32
HMGB1P09429 OR10T1P-201ENST00000424327 947 ntBASIC6.78□□□□□ -1.32
HMGB1P09429 IPMKP1-201ENST00000425988 855 ntBASIC6.78□□□□□ -1.32
HMGB1P09429 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.78□□□□□ -1.32
HMGB1P09429 GAPDHP48-201ENST00000436626 961 ntBASIC6.78□□□□□ -1.32
HMGB1P09429 PCBP2P1-201ENST00000437262 977 ntBASIC6.78□□□□□ -1.32
HMGB1P09429 FABP5P3-201ENST00000437960 408 ntBASIC6.78□□□□□ -1.32
HMGB1P09429 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.78□□□□□ -1.32
HMGB1P09429 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.78□□□□□ -1.32
HMGB1P09429 RPL23AP15-201ENST00000450202 459 ntBASIC6.78□□□□□ -1.32
HMGB1P09429 AC233982.1-201ENST00000451247 436 ntBASIC6.78□□□□□ -1.32
HMGB1P09429 AL606490.1-201ENST00000452266 765 ntBASIC6.78□□□□□ -1.32
HMGB1P09429 GTF2IP12-201ENST00000456547 356 ntBASIC6.78□□□□□ -1.32
HMGB1P09429 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC6.78□□□□□ -1.32
HMGB1P09429 ACA64.1-201ENST00000459171 127 ntBASIC6.78□□□□□ -1.32
HMGB1P09429 AC106806.2-201ENST00000509365 500 ntBASIC6.78□□□□□ -1.32
HMGB1P09429 RN7SKP96-201ENST00000516948 297 ntBASIC6.78□□□□□ -1.32
HMGB1P09429 AC021678.3-201ENST00000517893 476 ntBASIC6.78□□□□□ -1.32
HMGB1P09429 TRIM77BP-201ENST00000524985 1119 ntBASIC6.78□□□□□ -1.32
HMGB1P09429 PTP4A1P6-201ENST00000531034 478 ntBASIC6.78□□□□□ -1.32
HMGB1P09429 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
HMGB1P09429 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.78□□□□□ -1.32
HMGB1P09429 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC6.78□□□□□ -1.32
HMGB1P09429 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.78□□□□□ -1.32
HMGB1P09429 BNIP3P4-201ENST00000604946 565 ntBASIC6.78□□□□□ -1.32
HMGB1P09429 AC015712.7-201ENST00000615211 635 ntBASIC6.78□□□□□ -1.32
HMGB1P09429 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HMGB1P09429 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HMGB1P09429 AC073055.1-201ENST00000456901 1621 ntBASIC6.78□□□□□ -1.32
HMGB1P09429 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.78□□□□□ -1.32
HMGB1P09429 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HMGB1P09429 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
HMGB1P09429 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms