Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AL031320.1-201ENST00000604177 357 ntBASIC5.6□□□□□ -1.51
RB1P06400 RPL21P136-201ENST00000605378 396 ntBASIC5.6□□□□□ -1.51
RB1P06400 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.6□□□□□ -1.51
RB1P06400 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.6□□□□□ -1.51
RB1P06400 AC132825.1-201ENST00000463573 2247 ntBASIC5.6□□□□□ -1.51
RB1P06400 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
RB1P06400 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RB1P06400 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RB1P06400 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RB1P06400 AP005435.3-201ENST00000531260 3198 ntBASIC5.6□□□□□ -1.51
RB1P06400 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RB1P06400 AC107021.2-201ENST00000567714 2095 ntBASIC5.6□□□□□ -1.51
RB1P06400 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
RB1P06400 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RB1P06400 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.59□□□□□ -1.51
RB1P06400 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.59□□□□□ -1.51
RB1P06400 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RB1P06400 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.59□□□□□ -1.51
RB1P06400 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RB1P06400 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RB1P06400 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.59□□□□□ -1.51
RB1P06400 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RB1P06400 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RB1P06400 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
RB1P06400 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RB1P06400 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RB1P06400 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.59□□□□□ -1.51
RB1P06400 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
RB1P06400 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.59□□□□□ -1.51
RB1P06400 MIR137-201ENST00000385223 102 ntBASIC5.59□□□□□ -1.51
RB1P06400 OR8V1P-201ENST00000395193 873 ntBASIC5.59□□□□□ -1.51
RB1P06400 AP002530.1-201ENST00000405705 684 ntBASIC5.59□□□□□ -1.51
RB1P06400 COX6CP17-201ENST00000421389 185 ntBASIC5.59□□□□□ -1.51
RB1P06400 MTND2P11-201ENST00000423638 648 ntBASIC5.59□□□□□ -1.51
RB1P06400 SETP10-201ENST00000424368 814 ntBASIC5.59□□□□□ -1.51
RB1P06400 MTND4LP13-201ENST00000425022 298 ntBASIC5.59□□□□□ -1.51
RB1P06400 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.59□□□□□ -1.51
RB1P06400 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.59□□□□□ -1.51
RB1P06400 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.59□□□□□ -1.51
RB1P06400 RPS29P10-201ENST00000439197 166 ntBASIC5.59□□□□□ -1.51
RB1P06400 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.59□□□□□ -1.51
RB1P06400 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.59□□□□□ -1.51
RB1P06400 AC245517.2-201ENST00000442890 346 ntBASIC5.59□□□□□ -1.51
RB1P06400 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.59□□□□□ -1.51
RB1P06400 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.59□□□□□ -1.51
RB1P06400 AL627224.1-201ENST00000448334 444 ntBASIC5.59□□□□□ -1.51
RB1P06400 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.59□□□□□ -1.51
RB1P06400 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.59□□□□□ -1.51
RB1P06400 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.59□□□□□ -1.51
RB1P06400 IGLV2-34-201ENST00000490007 283 ntBASIC5.59□□□□□ -1.51
RB1P06400 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.59□□□□□ -1.51
RB1P06400 PRELID3BP5-201ENST00000508612 460 ntBASIC5.59□□□□□ -1.51
RB1P06400 GAPDHP62-201ENST00000515313 990 ntBASIC5.59□□□□□ -1.51
RB1P06400 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.59□□□□□ -1.51
RB1P06400 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.59□□□□□ -1.51
RB1P06400 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.59□□□□□ -1.51
RB1P06400 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.59□□□□□ -1.51
RB1P06400 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.59□□□□□ -1.51
RB1P06400 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.59□□□□□ -1.51
RB1P06400 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.59□□□□□ -1.51
RB1P06400 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RB1P06400 AC025857.2-201ENST00000602711 238 ntBASIC5.59□□□□□ -1.51
RB1P06400 MIR6780A-201ENST00000615089 68 ntBASIC5.59□□□□□ -1.51
RB1P06400 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.59□□□□□ -1.51
RB1P06400 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC5.59□□□□□ -1.51
RB1P06400 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.59□□□□□ -1.51
RB1P06400 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RB1P06400 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
RB1P06400 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.59□□□□□ -1.51
RB1P06400 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RB1P06400 IRF5P1-201ENST00000504852 2164 ntBASIC5.59□□□□□ -1.52
RB1P06400 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.52
RB1P06400 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
RB1P06400 AC017002.4-201ENST00000604721 1525 ntBASIC5.58□□□□□ -1.52
RB1P06400 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
RB1P06400 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RB1P06400 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RB1P06400 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RB1P06400 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.58□□□□□ -1.52
RB1P06400 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RB1P06400 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.58□□□□□ -1.52
RB1P06400 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RB1P06400 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.58□□□□□ -1.52
RB1P06400 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.58□□□□□ -1.52
RB1P06400 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.58□□□□□ -1.52
RB1P06400 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
RB1P06400 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RB1P06400 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RB1P06400 AC079741.1-201ENST00000321498 212 ntBASIC5.58□□□□□ -1.52
RB1P06400 SNORA62-201ENST00000365493 153 ntBASIC5.58□□□□□ -1.52
RB1P06400 RNU6-398P-201ENST00000384143 109 ntBASIC5.58□□□□□ -1.52
RB1P06400 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
RB1P06400 RPS16P5-201ENST00000406501 404 ntBASIC5.58□□□□□ -1.52
RB1P06400 HMGB3P10-201ENST00000434734 572 ntBASIC5.58□□□□□ -1.52
RB1P06400 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.58□□□□□ -1.52
RB1P06400 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.58□□□□□ -1.52
RB1P06400 RPL12P18-201ENST00000437175 325 ntBASIC5.58□□□□□ -1.52
RB1P06400 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.58□□□□□ -1.52
RB1P06400 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.58□□□□□ -1.52
RB1P06400 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 304.2 ms