Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.13□□□□□ -1.43
MBD4O95243 MTND2P31-201ENST00000512602 616 ntBASIC6.13□□□□□ -1.43
MBD4O95243 AC097486.1-201ENST00000515331 210 ntBASIC6.13□□□□□ -1.43
MBD4O95243 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC6.13□□□□□ -1.43
MBD4O95243 IGHV3-63-201ENST00000518422 341 ntBASIC6.13□□□□□ -1.43
MBD4O95243 AC020937.1-201ENST00000519677 1013 ntBASIC6.13□□□□□ -1.43
MBD4O95243 AC026688.1-201ENST00000520639 1168 ntBASIC6.13□□□□□ -1.43
MBD4O95243 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.13□□□□□ -1.43
MBD4O95243 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC6.13□□□□□ -1.43
MBD4O95243 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.13□□□□□ -1.43
MBD4O95243 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.13□□□□□ -1.43
MBD4O95243 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.13□□□□□ -1.43
MBD4O95243 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.13□□□□□ -1.43
MBD4O95243 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.13□□□□□ -1.43
MBD4O95243 AC019322.1-201ENST00000571869 389 ntBASIC6.13□□□□□ -1.43
MBD4O95243 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.13□□□□□ -1.43
MBD4O95243 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6.13□□□□□ -1.43
MBD4O95243 RNA5SP439-201ENST00000617595 124 ntBASIC6.13□□□□□ -1.43
MBD4O95243 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC6.13□□□□□ -1.43
MBD4O95243 AC079298.2-201ENST00000623885 459 ntBASIC6.13□□□□□ -1.43
MBD4O95243 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.13□□□□□ -1.43
MBD4O95243 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
MBD4O95243 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
MBD4O95243 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
MBD4O95243 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
MBD4O95243 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.13□□□□□ -1.43
MBD4O95243 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
MBD4O95243 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
MBD4O95243 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
MBD4O95243 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
MBD4O95243 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
MBD4O95243 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.12□□□□□ -1.43
MBD4O95243 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
MBD4O95243 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.12□□□□□ -1.43
MBD4O95243 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
MBD4O95243 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
MBD4O95243 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MBD4O95243 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MBD4O95243 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
MBD4O95243 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.12□□□□□ -1.43
MBD4O95243 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MBD4O95243 RN7SKP104-201ENST00000362605 328 ntBASIC6.12□□□□□ -1.43
MBD4O95243 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
MBD4O95243 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
MBD4O95243 AL645733.1-201ENST00000402250 217 ntBASIC6.12□□□□□ -1.43
MBD4O95243 RPL12P9-201ENST00000412942 488 ntBASIC6.12□□□□□ -1.43
MBD4O95243 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC6.12□□□□□ -1.43
MBD4O95243 AC006065.1-201ENST00000422539 802 ntBASIC6.12□□□□□ -1.43
MBD4O95243 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MBD4O95243 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MBD4O95243 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MBD4O95243 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.12□□□□□ -1.43
MBD4O95243 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.12□□□□□ -1.43
MBD4O95243 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC6.12□□□□□ -1.43
MBD4O95243 snoU13.20-201ENST00000459180 104 ntBASIC6.12□□□□□ -1.43
MBD4O95243 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
MBD4O95243 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.12□□□□□ -1.43
MBD4O95243 HAUS1P1-201ENST00000505275 832 ntBASIC6.12□□□□□ -1.43
MBD4O95243 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC6.12□□□□□ -1.43
MBD4O95243 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC6.12□□□□□ -1.43
MBD4O95243 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MBD4O95243 BTG4P1-201ENST00000510421 183 ntBASIC6.12□□□□□ -1.43
MBD4O95243 RN7SKP260-201ENST00000516907 149 ntBASIC6.12□□□□□ -1.43
MBD4O95243 AC027369.5-201ENST00000533838 755 ntBASIC6.12□□□□□ -1.43
MBD4O95243 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.12□□□□□ -1.43
MBD4O95243 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MBD4O95243 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.12□□□□□ -1.43
MBD4O95243 AC105254.2-201ENST00000603636 436 ntBASIC6.12□□□□□ -1.43
MBD4O95243 AL450345.1-202ENST00000605741 3881 ntBASIC6.12□□□□□ -1.43
MBD4O95243 AC034236.3-201ENST00000605999 461 ntBASIC6.12□□□□□ -1.43
MBD4O95243 BX323046.1-201ENST00000610145 535 ntBASIC6.12□□□□□ -1.43
MBD4O95243 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.12□□□□□ -1.43
MBD4O95243 RBPJP2-201ENST00000618187 1444 ntBASIC6.12□□□□□ -1.43
MBD4O95243 RPL23AP61-201ENST00000623642 466 ntBASIC6.12□□□□□ -1.43
MBD4O95243 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
MBD4O95243 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MBD4O95243 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
MBD4O95243 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MBD4O95243 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MBD4O95243 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
MBD4O95243 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
MBD4O95243 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MBD4O95243 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
MBD4O95243 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
MBD4O95243 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MBD4O95243 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.11□□□□□ -1.43
MBD4O95243 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.11□□□□□ -1.43
MBD4O95243 RNA5SP123-201ENST00000363244 119 ntBASIC6.11□□□□□ -1.43
MBD4O95243 AL390316.1-201ENST00000406279 553 ntBASIC6.11□□□□□ -1.43
MBD4O95243 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
MBD4O95243 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC6.11□□□□□ -1.43
MBD4O95243 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.11□□□□□ -1.43
MBD4O95243 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC6.11□□□□□ -1.43
MBD4O95243 RN7SL443P-201ENST00000464331 290 ntBASIC6.11□□□□□ -1.43
MBD4O95243 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
MBD4O95243 AC010350.1-201ENST00000504908 231 ntBASIC6.11□□□□□ -1.43
MBD4O95243 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.11□□□□□ -1.43
MBD4O95243 MTCYBP19-201ENST00000517463 1124 ntBASIC6.11□□□□□ -1.43
MBD4O95243 AP003168.1-201ENST00000530091 307 ntBASIC6.11□□□□□ -1.43
MBD4O95243 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms