Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXA3O43365 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXA3O43365 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.27□□□□□ -1.57
HOXA3O43365 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC5.27□□□□□ -1.57
HOXA3O43365 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXA3O43365 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.27□□□□□ -1.57
HOXA3O43365 TEK-202ENST00000406359 3935 ntTSL 2 BASIC5.27□□□□□ -1.57
HOXA3O43365 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.27□□□□□ -1.57
HOXA3O43365 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
HOXA3O43365 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
HOXA3O43365 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.26□□□□□ -1.57
HOXA3O43365 AC093278.2-201ENST00000564956 2485 ntBASIC5.26□□□□□ -1.57
HOXA3O43365 HSPD1P9-201ENST00000420325 1636 ntBASIC5.26□□□□□ -1.57
HOXA3O43365 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXA3O43365 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXA3O43365 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXA3O43365 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXA3O43365 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXA3O43365 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXA3O43365 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HOXA3O43365 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXA3O43365 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXA3O43365 AC011447.7-201ENST00000624228 1590 ntBASIC5.26□□□□□ -1.57
HOXA3O43365 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HOXA3O43365 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXA3O43365 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXA3O43365 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HOXA3O43365 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXA3O43365 RNA5SP433-201ENST00000364491 114 ntBASIC5.26□□□□□ -1.57
HOXA3O43365 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXA3O43365 SUGT1P2-201ENST00000379452 992 ntBASIC5.26□□□□□ -1.57
HOXA3O43365 MIR188-201ENST00000385034 86 ntBASIC5.26□□□□□ -1.57
HOXA3O43365 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HOXA3O43365 RNU6-1300P-201ENST00000391046 108 ntBASIC5.26□□□□□ -1.57
HOXA3O43365 OR51A3P-201ENST00000413596 924 ntBASIC5.26□□□□□ -1.57
HOXA3O43365 RPL23AP39-201ENST00000415533 405 ntBASIC5.26□□□□□ -1.57
HOXA3O43365 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXA3O43365 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXA3O43365 MGAT2P2-201ENST00000427194 797 ntBASIC5.26□□□□□ -1.57
HOXA3O43365 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.26□□□□□ -1.57
HOXA3O43365 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXA3O43365 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXA3O43365 RPL21P110-201ENST00000433345 446 ntBASIC5.26□□□□□ -1.57
HOXA3O43365 AC241584.1-201ENST00000438469 1241 ntBASIC5.26□□□□□ -1.57
HOXA3O43365 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXA3O43365 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXA3O43365 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXA3O43365 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HOXA3O43365 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXA3O43365 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.26□□□□□ -1.57
HOXA3O43365 GM2AP2-201ENST00000491764 562 ntBASIC5.26□□□□□ -1.57
HOXA3O43365 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.26□□□□□ -1.57
HOXA3O43365 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXA3O43365 AC018645.1-201ENST00000505003 109 ntBASIC5.26□□□□□ -1.57
HOXA3O43365 AC006499.5-201ENST00000505037 514 ntBASIC5.26□□□□□ -1.57
HOXA3O43365 AC091874.2-201ENST00000505889 720 ntBASIC5.26□□□□□ -1.57
HOXA3O43365 IGKV2D-10-201ENST00000520194 281 ntBASIC5.26□□□□□ -1.57
HOXA3O43365 AC138832.1-201ENST00000522871 556 ntBASIC5.26□□□□□ -1.57
HOXA3O43365 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HOXA3O43365 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC5.26□□□□□ -1.57
HOXA3O43365 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXA3O43365 AL162632.2-201ENST00000553933 399 ntBASIC5.26□□□□□ -1.57
HOXA3O43365 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXA3O43365 AP005262.1-201ENST00000582646 997 ntBASIC5.26□□□□□ -1.57
HOXA3O43365 AC026898.1-201ENST00000586404 571 ntBASIC5.26□□□□□ -1.57
HOXA3O43365 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.26□□□□□ -1.57
HOXA3O43365 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXA3O43365 AL078623.1-201ENST00000602702 907 ntBASIC5.26□□□□□ -1.57
HOXA3O43365 AC091805.2-201ENST00000603848 235 ntBASIC5.26□□□□□ -1.57
HOXA3O43365 NDUFA8P1-201ENST00000605525 367 ntBASIC5.26□□□□□ -1.57
HOXA3O43365 AC091946.2-201ENST00000606105 291 ntBASIC5.26□□□□□ -1.57
HOXA3O43365 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.26□□□□□ -1.57
HOXA3O43365 RN7SL261P-201ENST00000613441 282 ntBASIC5.26□□□□□ -1.57
HOXA3O43365 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.26□□□□□ -1.57
HOXA3O43365 AC013476.2-201ENST00000614456 459 ntBASIC5.26□□□□□ -1.57
HOXA3O43365 AL356266.1-201ENST00000623311 483 ntBASIC5.26□□□□□ -1.57
HOXA3O43365 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.26□□□□□ -1.57
HOXA3O43365 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HOXA3O43365 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.26□□□□□ -1.57
HOXA3O43365 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
HOXA3O43365 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXA3O43365 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HOXA3O43365 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXA3O43365 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
HOXA3O43365 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
HOXA3O43365 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
HOXA3O43365 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.26□□□□□ -1.57
HOXA3O43365 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HOXA3O43365 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXA3O43365 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC5.26□□□□□ -1.57
HOXA3O43365 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.26□□□□□ -1.57
HOXA3O43365 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXA3O43365 AC093311.1-201ENST00000506586 2021 ntBASIC5.26□□□□□ -1.57
HOXA3O43365 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HOXA3O43365 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.26□□□□□ -1.57
HOXA3O43365 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.26□□□□□ -1.57
HOXA3O43365 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.26□□□□□ -1.57
HOXA3O43365 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC5.26□□□□□ -1.57
HOXA3O43365 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
HOXA3O43365 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms