Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.9□□□□□ -1.63
LSM1O15116 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
LSM1O15116 SNORA67-201ENST00000384423 137 ntBASIC4.9□□□□□ -1.63
LSM1O15116 AC009804.1-201ENST00000400949 179 ntBASIC4.9□□□□□ -1.63
LSM1O15116 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.9□□□□□ -1.63
LSM1O15116 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.9□□□□□ -1.63
LSM1O15116 OR2AH1P-201ENST00000425717 928 ntBASIC4.9□□□□□ -1.63
LSM1O15116 SIAH1P1-201ENST00000479411 923 ntBASIC4.9□□□□□ -1.63
LSM1O15116 RN7SL184P-201ENST00000488308 297 ntBASIC4.9□□□□□ -1.63
LSM1O15116 UBA52P3-201ENST00000491303 382 ntBASIC4.9□□□□□ -1.63
LSM1O15116 GTF2F2P1-201ENST00000511083 675 ntBASIC4.9□□□□□ -1.63
LSM1O15116 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.9□□□□□ -1.63
LSM1O15116 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.9□□□□□ -1.63
LSM1O15116 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.9□□□□□ -1.63
LSM1O15116 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.9□□□□□ -1.63
LSM1O15116 PDCD5P1-201ENST00000543528 309 ntBASIC4.9□□□□□ -1.63
LSM1O15116 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.9□□□□□ -1.63
LSM1O15116 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.9□□□□□ -1.63
LSM1O15116 NDUFB4P11-201ENST00000560510 395 ntBASIC4.9□□□□□ -1.63
LSM1O15116 CD24P2-201ENST00000565486 219 ntBASIC4.9□□□□□ -1.63
LSM1O15116 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.9□□□□□ -1.63
LSM1O15116 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LSM1O15116 AC020978.7-201ENST00000575953 1187 ntBASIC4.9□□□□□ -1.63
LSM1O15116 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.9□□□□□ -1.63
LSM1O15116 SNORD91B-202ENST00000608459 222 ntBASIC4.9□□□□□ -1.63
LSM1O15116 AC037198.3-201ENST00000616754 526 ntBASIC4.9□□□□□ -1.63
LSM1O15116 AC090527.3-201ENST00000619041 548 ntBASIC4.9□□□□□ -1.63
LSM1O15116 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.9□□□□□ -1.63
LSM1O15116 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.9□□□□□ -1.63
LSM1O15116 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
LSM1O15116 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.9□□□□□ -1.63
LSM1O15116 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
LSM1O15116 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.9□□□□□ -1.63
LSM1O15116 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
LSM1O15116 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
LSM1O15116 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
LSM1O15116 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LSM1O15116 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.9□□□□□ -1.63
LSM1O15116 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
LSM1O15116 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
LSM1O15116 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LSM1O15116 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
LSM1O15116 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LSM1O15116 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
LSM1O15116 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LSM1O15116 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.89□□□□□ -1.63
LSM1O15116 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.89□□□□□ -1.63
LSM1O15116 AL450326.2-201ENST00000421913 1962 ntBASIC4.89□□□□□ -1.63
LSM1O15116 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
LSM1O15116 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LSM1O15116 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LSM1O15116 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
LSM1O15116 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
LSM1O15116 RNA5SP183-201ENST00000362452 119 ntBASIC4.89□□□□□ -1.63
LSM1O15116 OR13C3-201ENST00000374781 1108 ntBASIC4.89□□□□□ -1.63
LSM1O15116 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.89□□□□□ -1.63
LSM1O15116 IPMKP1-201ENST00000425988 855 ntBASIC4.89□□□□□ -1.63
LSM1O15116 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.89□□□□□ -1.63
LSM1O15116 AC004980.3-201ENST00000447046 365 ntBASIC4.89□□□□□ -1.63
LSM1O15116 AL356981.1-201ENST00000454879 684 ntBASIC4.89□□□□□ -1.63
LSM1O15116 RPL5P30-201ENST00000465511 891 ntBASIC4.89□□□□□ -1.63
LSM1O15116 RPL23AP37-201ENST00000479658 549 ntBASIC4.89□□□□□ -1.63
LSM1O15116 RN7SL214P-201ENST00000487317 265 ntBASIC4.89□□□□□ -1.63
LSM1O15116 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LSM1O15116 PPM1AP1-201ENST00000502740 1135 ntBASIC4.89□□□□□ -1.63
LSM1O15116 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LSM1O15116 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.89□□□□□ -1.63
LSM1O15116 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.89□□□□□ -1.63
LSM1O15116 RPL23AP53-201ENST00000521854 457 ntBASIC4.89□□□□□ -1.63
LSM1O15116 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.89□□□□□ -1.63
LSM1O15116 HNRNPRP2-201ENST00000528421 743 ntBASIC4.89□□□□□ -1.63
LSM1O15116 AC134349.2-201ENST00000535136 910 ntBASIC4.89□□□□□ -1.63
LSM1O15116 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.89□□□□□ -1.63
LSM1O15116 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
LSM1O15116 AC116553.2-201ENST00000564203 463 ntBASIC4.89□□□□□ -1.63
LSM1O15116 MIR3614-201ENST00000581261 86 ntBASIC4.89□□□□□ -1.63
LSM1O15116 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.89□□□□□ -1.63
LSM1O15116 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.89□□□□□ -1.63
LSM1O15116 AL589674.2-201ENST00000604304 337 ntBASIC4.89□□□□□ -1.63
LSM1O15116 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.89□□□□□ -1.63
LSM1O15116 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
LSM1O15116 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
LSM1O15116 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.89□□□□□ -1.63
LSM1O15116 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
LSM1O15116 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.89□□□□□ -1.63
LSM1O15116 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.89□□□□□ -1.63
LSM1O15116 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LSM1O15116 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.88□□□□□ -1.63
LSM1O15116 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LSM1O15116 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.88□□□□□ -1.63
LSM1O15116 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LSM1O15116 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.88□□□□□ -1.63
LSM1O15116 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LSM1O15116 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.88□□□□□ -1.63
LSM1O15116 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.88□□□□□ -1.63
LSM1O15116 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.88□□□□□ -1.63
LSM1O15116 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
LSM1O15116 RN7SKP113-201ENST00000363891 295 ntBASIC4.88□□□□□ -1.63
LSM1O15116 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.88□□□□□ -1.63
LSM1O15116 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 145.9 ms